Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PTPN20Q4JDL3 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PTPN20Q4JDL3 AL603750.1-201ENST00000624216 1717 ntBASIC5.2□□□□□ -1.58
PTPN20Q4JDL3 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PTPN20Q4JDL3 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PTPN20Q4JDL3 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.2□□□□□ -1.58
PTPN20Q4JDL3 AC017079.1-201ENST00000333650 415 ntBASIC5.2□□□□□ -1.58
PTPN20Q4JDL3 RN7SKP104-201ENST00000362605 328 ntBASIC5.2□□□□□ -1.58
PTPN20Q4JDL3 RN7SKP95-201ENST00000362860 303 ntBASIC5.2□□□□□ -1.58
PTPN20Q4JDL3 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
PTPN20Q4JDL3 SPTLC1P2-201ENST00000407089 121 ntBASIC5.2□□□□□ -1.58
PTPN20Q4JDL3 Z68694.1-201ENST00000413929 841 ntBASIC5.2□□□□□ -1.58
PTPN20Q4JDL3 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.2□□□□□ -1.58
PTPN20Q4JDL3 AL121878.1-201ENST00000418638 859 ntBASIC5.2□□□□□ -1.58
PTPN20Q4JDL3 MGAT2P2-201ENST00000427194 797 ntBASIC5.2□□□□□ -1.58
PTPN20Q4JDL3 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.2□□□□□ -1.58
PTPN20Q4JDL3 AC093414.1-201ENST00000434712 514 ntBASIC5.2□□□□□ -1.58
PTPN20Q4JDL3 AL627308.1-201ENST00000435693 821 ntBASIC5.2□□□□□ -1.58
PTPN20Q4JDL3 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.2□□□□□ -1.58
PTPN20Q4JDL3 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.2□□□□□ -1.58
PTPN20Q4JDL3 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.2□□□□□ -1.58
PTPN20Q4JDL3 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC5.2□□□□□ -1.58
PTPN20Q4JDL3 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PTPN20Q4JDL3 RN7SL319P-201ENST00000480656 221 ntBASIC5.2□□□□□ -1.58
PTPN20Q4JDL3 RN7SL97P-201ENST00000486780 299 ntBASIC5.2□□□□□ -1.58
PTPN20Q4JDL3 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.2□□□□□ -1.58
PTPN20Q4JDL3 ENPP7P9-201ENST00000514456 627 ntBASIC5.2□□□□□ -1.58
PTPN20Q4JDL3 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.2□□□□□ -1.58
PTPN20Q4JDL3 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.2□□□□□ -1.58
PTPN20Q4JDL3 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.2□□□□□ -1.58
PTPN20Q4JDL3 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.2□□□□□ -1.58
PTPN20Q4JDL3 MIR6719-201ENST00000622428 87 ntBASIC5.2□□□□□ -1.58
PTPN20Q4JDL3 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.2□□□□□ -1.58
PTPN20Q4JDL3 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
PTPN20Q4JDL3 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PTPN20Q4JDL3 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.2□□□□□ -1.58
PTPN20Q4JDL3 HSPA8P14-201ENST00000552265 1805 ntBASIC5.2□□□□□ -1.58
PTPN20Q4JDL3 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PTPN20Q4JDL3 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PTPN20Q4JDL3 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PTPN20Q4JDL3 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PTPN20Q4JDL3 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.19□□□□□ -1.58
PTPN20Q4JDL3 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
PTPN20Q4JDL3 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
PTPN20Q4JDL3 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
PTPN20Q4JDL3 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
PTPN20Q4JDL3 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PTPN20Q4JDL3 Z97832.1-201ENST00000402490 328 ntBASIC5.19□□□□□ -1.58
PTPN20Q4JDL3 GNG5P5-201ENST00000420444 220 ntBASIC5.19□□□□□ -1.58
PTPN20Q4JDL3 OR5M12P-201ENST00000423388 929 ntBASIC5.19□□□□□ -1.58
PTPN20Q4JDL3 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.19□□□□□ -1.58
PTPN20Q4JDL3 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.19□□□□□ -1.58
PTPN20Q4JDL3 PSMD10P3-201ENST00000437000 448 ntBASIC5.19□□□□□ -1.58
PTPN20Q4JDL3 TRY2P-201ENST00000448860 689 ntBASIC5.19□□□□□ -1.58
PTPN20Q4JDL3 RN7SL517P-201ENST00000462240 305 ntBASIC5.19□□□□□ -1.58
PTPN20Q4JDL3 RN7SL515P-201ENST00000463999 297 ntBASIC5.19□□□□□ -1.58
PTPN20Q4JDL3 RPL7AP6-201ENST00000477943 801 ntBASIC5.19□□□□□ -1.58
PTPN20Q4JDL3 AC017007.3-201ENST00000479865 435 ntBASIC5.19□□□□□ -1.58
PTPN20Q4JDL3 AC140172.1-201ENST00000502928 141 ntBASIC5.19□□□□□ -1.58
PTPN20Q4JDL3 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.19□□□□□ -1.58
PTPN20Q4JDL3 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.19□□□□□ -1.58
PTPN20Q4JDL3 TVP23CP2-201ENST00000571473 623 ntBASIC5.19□□□□□ -1.58
PTPN20Q4JDL3 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.19□□□□□ -1.58
PTPN20Q4JDL3 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.19□□□□□ -1.58
PTPN20Q4JDL3 AL451049.1-201ENST00000608672 497 ntBASIC5.19□□□□□ -1.58
PTPN20Q4JDL3 AC037198.3-201ENST00000616754 526 ntBASIC5.19□□□□□ -1.58
PTPN20Q4JDL3 AL022401.1-201ENST00000619498 108 ntBASIC5.19□□□□□ -1.58
PTPN20Q4JDL3 AC019206.1-201ENST00000621938 425 ntBASIC5.19□□□□□ -1.58
PTPN20Q4JDL3 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PTPN20Q4JDL3 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
PTPN20Q4JDL3 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
PTPN20Q4JDL3 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PTPN20Q4JDL3 AC097063.1-201ENST00000426714 1797 ntBASIC5.19□□□□□ -1.58
PTPN20Q4JDL3 AC068870.3-201ENST00000625077 2536 ntBASIC5.19□□□□□ -1.58
PTPN20Q4JDL3 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.18□□□□□ -1.58
PTPN20Q4JDL3 AL731532.2-201ENST00000623542 1953 ntBASIC5.18□□□□□ -1.58
PTPN20Q4JDL3 MRRFP1-201ENST00000435941 1675 ntBASIC5.18□□□□□ -1.58
PTPN20Q4JDL3 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.18□□□□□ -1.58
PTPN20Q4JDL3 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PTPN20Q4JDL3 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PTPN20Q4JDL3 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PTPN20Q4JDL3 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
PTPN20Q4JDL3 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PTPN20Q4JDL3 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PTPN20Q4JDL3 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
PTPN20Q4JDL3 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.18□□□□□ -1.58
PTPN20Q4JDL3 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
PTPN20Q4JDL3 AP002530.1-201ENST00000405705 684 ntBASIC5.18□□□□□ -1.58
PTPN20Q4JDL3 GTF2IP5-201ENST00000414608 731 ntBASIC5.18□□□□□ -1.58
PTPN20Q4JDL3 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.18□□□□□ -1.58
PTPN20Q4JDL3 TBCAP2-201ENST00000416175 326 ntBASIC5.18□□□□□ -1.58
PTPN20Q4JDL3 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.18□□□□□ -1.58
PTPN20Q4JDL3 RBMY2QP-201ENST00000429799 1147 ntBASIC5.18□□□□□ -1.58
PTPN20Q4JDL3 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.18□□□□□ -1.58
PTPN20Q4JDL3 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PTPN20Q4JDL3 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.18□□□□□ -1.58
PTPN20Q4JDL3 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.18□□□□□ -1.58
PTPN20Q4JDL3 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.18□□□□□ -1.58
PTPN20Q4JDL3 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.18□□□□□ -1.58
PTPN20Q4JDL3 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms