Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
SSR1P43307 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
SSR1P43307 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SSR1P43307 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SSR1P43307 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.54□□□□□ -1.52
SSR1P43307 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.53□□□□□ -1.52
SSR1P43307 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SSR1P43307 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SSR1P43307 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SSR1P43307 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
SSR1P43307 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
SSR1P43307 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SSR1P43307 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.53□□□□□ -1.52
SSR1P43307 RNA5SP335-201ENST00000363817 110 ntBASIC5.53□□□□□ -1.52
SSR1P43307 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.53□□□□□ -1.52
SSR1P43307 AL121834.1-202ENST00000404494 277 ntBASIC5.53□□□□□ -1.52
SSR1P43307 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.53□□□□□ -1.52
SSR1P43307 RNA5SP178-201ENST00000410380 128 ntBASIC5.53□□□□□ -1.52
SSR1P43307 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.53□□□□□ -1.52
SSR1P43307 AL133325.1-201ENST00000421090 382 ntBASIC5.53□□□□□ -1.52
SSR1P43307 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.53□□□□□ -1.52
SSR1P43307 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
SSR1P43307 DSTNP5-201ENST00000427921 523 ntBASIC5.53□□□□□ -1.52
SSR1P43307 HSPD1P12-201ENST00000429127 1069 ntBASIC5.53□□□□□ -1.52
SSR1P43307 HMGB3P10-201ENST00000434734 572 ntBASIC5.53□□□□□ -1.52
SSR1P43307 CLUHP1-201ENST00000435012 1190 ntBASIC5.53□□□□□ -1.52
SSR1P43307 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.53□□□□□ -1.52
SSR1P43307 FGF7P3-201ENST00000454645 303 ntBASIC5.53□□□□□ -1.52
SSR1P43307 AC245028.2-201ENST00000458673 253 ntBASIC5.53□□□□□ -1.52
SSR1P43307 PPIAP19-201ENST00000486414 492 ntBASIC5.53□□□□□ -1.52
SSR1P43307 RPL15P21-201ENST00000495592 567 ntBASIC5.53□□□□□ -1.52
SSR1P43307 MYL12BP2-201ENST00000503948 512 ntBASIC5.53□□□□□ -1.52
SSR1P43307 EIF3KP3-201ENST00000514461 639 ntBASIC5.53□□□□□ -1.52
SSR1P43307 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.53□□□□□ -1.52
SSR1P43307 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.53□□□□□ -1.52
SSR1P43307 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.53□□□□□ -1.52
SSR1P43307 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.53□□□□□ -1.52
SSR1P43307 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.53□□□□□ -1.52
SSR1P43307 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.53□□□□□ -1.52
SSR1P43307 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SSR1P43307 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SSR1P43307 MIR6839-201ENST00000620425 113 ntBASIC5.53□□□□□ -1.52
SSR1P43307 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.53□□□□□ -1.52
SSR1P43307 AC074101.1-201ENST00000637861 241 ntBASIC5.53□□□□□ -1.52
SSR1P43307 OR8A1-204ENST00000642111 1145 ntBASIC5.53□□□□□ -1.52
SSR1P43307 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SSR1P43307 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.53□□□□□ -1.52
SSR1P43307 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SSR1P43307 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SSR1P43307 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SSR1P43307 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SSR1P43307 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SSR1P43307 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
SSR1P43307 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.52□□□□□ -1.53
SSR1P43307 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SSR1P43307 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SSR1P43307 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.52□□□□□ -1.53
SSR1P43307 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
SSR1P43307 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.52□□□□□ -1.53
SSR1P43307 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.52□□□□□ -1.53
SSR1P43307 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SSR1P43307 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
SSR1P43307 AC011155.1-201ENST00000316512 456 ntBASIC5.52□□□□□ -1.53
SSR1P43307 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SSR1P43307 MIR589-201ENST00000385238 99 ntBASIC5.52□□□□□ -1.53
SSR1P43307 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
SSR1P43307 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.52□□□□□ -1.53
SSR1P43307 FAM96AP1-201ENST00000430879 482 ntBASIC5.52□□□□□ -1.53
SSR1P43307 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.52□□□□□ -1.53
SSR1P43307 AP000281.1-201ENST00000444036 316 ntBASIC5.52□□□□□ -1.53
SSR1P43307 AC099063.2-201ENST00000446360 662 ntBASIC5.52□□□□□ -1.53
SSR1P43307 NOP56P2-201ENST00000447491 769 ntBASIC5.52□□□□□ -1.53
SSR1P43307 AL035090.1-201ENST00000454835 332 ntBASIC5.52□□□□□ -1.53
SSR1P43307 AL133244.1-201ENST00000456007 258 ntBASIC5.52□□□□□ -1.53
SSR1P43307 CREM-226ENST00000469949 721 ntTSL 3 BASIC5.52□□□□□ -1.53
SSR1P43307 CBX1P5-201ENST00000475330 559 ntBASIC5.52□□□□□ -1.53
SSR1P43307 RN7SL547P-201ENST00000490793 290 ntBASIC5.52□□□□□ -1.53
SSR1P43307 RN7SL447P-201ENST00000494711 245 ntBASIC5.52□□□□□ -1.53
SSR1P43307 RN7SL466P-201ENST00000497546 295 ntBASIC5.52□□□□□ -1.53
SSR1P43307 NIFKP7-201ENST00000503365 834 ntBASIC5.52□□□□□ -1.53
SSR1P43307 AC090568.1-201ENST00000509499 856 ntBASIC5.52□□□□□ -1.53
SSR1P43307 AC016559.2-201ENST00000510759 359 ntBASIC5.52□□□□□ -1.53
SSR1P43307 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.52□□□□□ -1.53
SSR1P43307 VTA1P2-201ENST00000520205 911 ntBASIC5.52□□□□□ -1.53
SSR1P43307 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.52□□□□□ -1.53
SSR1P43307 AC090819.1-201ENST00000523800 1111 ntBASIC5.52□□□□□ -1.53
SSR1P43307 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.52□□□□□ -1.53
SSR1P43307 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SSR1P43307 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.52□□□□□ -1.53
SSR1P43307 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.52□□□□□ -1.53
SSR1P43307 MTCYBP13-201ENST00000578634 1093 ntBASIC5.52□□□□□ -1.53
SSR1P43307 RN7SL708P-201ENST00000580952 299 ntBASIC5.52□□□□□ -1.53
SSR1P43307 RN7SL435P-201ENST00000584418 282 ntBASIC5.52□□□□□ -1.53
SSR1P43307 SUGT1P3-202ENST00000604259 383 ntBASIC5.52□□□□□ -1.53
SSR1P43307 AL162431.4-201ENST00000604674 411 ntBASIC5.52□□□□□ -1.53
SSR1P43307 AC005840.5-201ENST00000619166 599 ntBASIC5.52□□□□□ -1.53
SSR1P43307 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
SSR1P43307 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
SSR1P43307 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SSR1P43307 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms