Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 BX323845.1-201ENST00000432417 179 ntBASIC5□□□□□ -1.61
RPA3P35244 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5□□□□□ -1.61
RPA3P35244 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5□□□□□ -1.61
RPA3P35244 AL163193.1-201ENST00000444895 788 ntBASIC5□□□□□ -1.61
RPA3P35244 AL389915.2-201ENST00000454576 441 ntBASIC5□□□□□ -1.61
RPA3P35244 HMGB1P4-201ENST00000455362 567 ntBASIC5□□□□□ -1.61
RPA3P35244 RN7SL799P-201ENST00000475891 298 ntBASIC5□□□□□ -1.61
RPA3P35244 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5□□□□□ -1.61
RPA3P35244 RN7SL222P-201ENST00000476452 299 ntBASIC5□□□□□ -1.61
RPA3P35244 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5□□□□□ -1.61
RPA3P35244 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5□□□□□ -1.61
RPA3P35244 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5□□□□□ -1.61
RPA3P35244 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5□□□□□ -1.61
RPA3P35244 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
RPA3P35244 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5□□□□□ -1.61
RPA3P35244 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5□□□□□ -1.61
RPA3P35244 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5□□□□□ -1.61
RPA3P35244 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5□□□□□ -1.61
RPA3P35244 AC099494.2-201ENST00000623371 978 ntBASIC5□□□□□ -1.61
RPA3P35244 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5□□□□□ -1.61
RPA3P35244 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5□□□□□ -1.61
RPA3P35244 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5□□□□□ -1.61
RPA3P35244 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5□□□□□ -1.61
RPA3P35244 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
RPA3P35244 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
RPA3P35244 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
RPA3P35244 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5□□□□□ -1.61
RPA3P35244 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RPA3P35244 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5□□□□□ -1.61
RPA3P35244 PCAT14-202ENST00000627127 3935 ntBASIC5□□□□□ -1.61
RPA3P35244 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RPA3P35244 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
RPA3P35244 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
RPA3P35244 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RPA3P35244 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC4.99□□□□□ -1.61
RPA3P35244 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.99□□□□□ -1.61
RPA3P35244 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
RPA3P35244 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
RPA3P35244 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.99□□□□□ -1.61
RPA3P35244 RN7SKP113-201ENST00000363891 295 ntBASIC4.99□□□□□ -1.61
RPA3P35244 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RPA3P35244 AL050305.1-201ENST00000399993 1230 ntBASIC4.99□□□□□ -1.61
RPA3P35244 AP000580.1-201ENST00000404439 358 ntBASIC4.99□□□□□ -1.61
RPA3P35244 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.99□□□□□ -1.61
RPA3P35244 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.99□□□□□ -1.61
RPA3P35244 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RPA3P35244 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.99□□□□□ -1.61
RPA3P35244 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.99□□□□□ -1.61
RPA3P35244 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC4.99□□□□□ -1.61
RPA3P35244 SNRPCP2-201ENST00000504370 475 ntBASIC4.99□□□□□ -1.61
RPA3P35244 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.99□□□□□ -1.61
RPA3P35244 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.99□□□□□ -1.61
RPA3P35244 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.99□□□□□ -1.61
RPA3P35244 BMPR1APS2-201ENST00000527904 1012 ntBASIC4.99□□□□□ -1.61
RPA3P35244 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.99□□□□□ -1.61
RPA3P35244 AC022832.1-201ENST00000530718 645 ntBASIC4.99□□□□□ -1.61
RPA3P35244 OR10G5P-201ENST00000532733 358 ntBASIC4.99□□□□□ -1.61
RPA3P35244 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.99□□□□□ -1.61
RPA3P35244 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.99□□□□□ -1.61
RPA3P35244 HAUS8P1-201ENST00000549005 542 ntBASIC4.99□□□□□ -1.61
RPA3P35244 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.99□□□□□ -1.61
RPA3P35244 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.99□□□□□ -1.61
RPA3P35244 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RPA3P35244 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.99□□□□□ -1.61
RPA3P35244 TAS2R6P-201ENST00000605022 826 ntBASIC4.99□□□□□ -1.61
RPA3P35244 AL121612.2-201ENST00000612261 482 ntBASIC4.99□□□□□ -1.61
RPA3P35244 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.99□□□□□ -1.61
RPA3P35244 AC132825.8-201ENST00000640783 297 ntBASIC4.99□□□□□ -1.61
RPA3P35244 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RPA3P35244 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
RPA3P35244 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RPA3P35244 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RPA3P35244 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RPA3P35244 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RPA3P35244 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RPA3P35244 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.99□□□□□ -1.61
RPA3P35244 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
RPA3P35244 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RPA3P35244 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RPA3P35244 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
RPA3P35244 AC009643.2-201ENST00000603543 1448 ntBASIC4.98□□□□□ -1.61
RPA3P35244 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RPA3P35244 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RPA3P35244 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RPA3P35244 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
RPA3P35244 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
RPA3P35244 RPL23P2-201ENST00000320371 421 ntBASIC4.98□□□□□ -1.61
RPA3P35244 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.98□□□□□ -1.61
RPA3P35244 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RPA3P35244 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC4.98□□□□□ -1.61
RPA3P35244 AC012123.2-201ENST00000485809 248 ntBASIC4.98□□□□□ -1.61
RPA3P35244 RPS4XP14-201ENST00000493072 781 ntBASIC4.98□□□□□ -1.61
RPA3P35244 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.98□□□□□ -1.61
RPA3P35244 AC006499.3-201ENST00000506077 748 ntBASIC4.98□□□□□ -1.61
RPA3P35244 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC4.98□□□□□ -1.61
RPA3P35244 NPM1P21-201ENST00000513394 762 ntBASIC4.98□□□□□ -1.61
RPA3P35244 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.98□□□□□ -1.61
RPA3P35244 AC012339.2-201ENST00000523996 453 ntBASIC4.98□□□□□ -1.61
RPA3P35244 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.98□□□□□ -1.61
RPA3P35244 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms