Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AL049874.2-201ENST00000492636 288 ntBASIC7.76□□□□□ -1.17
CLIP1P30622 OR5M2P-201ENST00000529003 936 ntBASIC7.76□□□□□ -1.17
CLIP1P30622 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC7.76□□□□□ -1.17
CLIP1P30622 AL110118.1-201ENST00000553543 400 ntBASIC7.76□□□□□ -1.17
CLIP1P30622 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CLIP1P30622 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC7.76□□□□□ -1.17
CLIP1P30622 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CLIP1P30622 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC7.76□□□□□ -1.17
CLIP1P30622 AC007497.1-201ENST00000610421 561 ntBASIC7.76□□□□□ -1.17
CLIP1P30622 AC083809.1-201ENST00000615051 472 ntBASIC7.76□□□□□ -1.17
CLIP1P30622 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CLIP1P30622 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
CLIP1P30622 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CLIP1P30622 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
CLIP1P30622 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC7.75□□□□□ -1.17
CLIP1P30622 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CLIP1P30622 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CLIP1P30622 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CLIP1P30622 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CLIP1P30622 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
CLIP1P30622 GLUD1P9-201ENST00000420997 1173 ntBASIC7.75□□□□□ -1.17
CLIP1P30622 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC7.75□□□□□ -1.17
CLIP1P30622 AC128716.1-201ENST00000475129 166 ntBASIC7.75□□□□□ -1.17
CLIP1P30622 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC7.75□□□□□ -1.17
CLIP1P30622 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC7.75□□□□□ -1.17
CLIP1P30622 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC7.75□□□□□ -1.17
CLIP1P30622 AC034205.1-201ENST00000520621 638 ntBASIC7.75□□□□□ -1.17
CLIP1P30622 SOX5P1-201ENST00000524155 1127 ntBASIC7.75□□□□□ -1.17
CLIP1P30622 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC7.75□□□□□ -1.17
CLIP1P30622 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CLIP1P30622 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CLIP1P30622 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC7.75□□□□□ -1.17
CLIP1P30622 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CLIP1P30622 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
CLIP1P30622 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC7.74□□□□□ -1.17
CLIP1P30622 AL132640.2-201ENST00000559968 1698 ntBASIC7.74□□□□□ -1.17
CLIP1P30622 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
CLIP1P30622 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC7.74□□□□□ -1.17
CLIP1P30622 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CLIP1P30622 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CLIP1P30622 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC7.74□□□□□ -1.17
CLIP1P30622 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CLIP1P30622 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
CLIP1P30622 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC7.74□□□□□ -1.17
CLIP1P30622 VDAC1P6-201ENST00000430062 855 ntBASIC7.74□□□□□ -1.17
CLIP1P30622 MRPL35P2-201ENST00000448009 511 ntBASIC7.74□□□□□ -1.17
CLIP1P30622 BUD31P1-201ENST00000521828 359 ntBASIC7.74□□□□□ -1.17
CLIP1P30622 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CLIP1P30622 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC7.74□□□□□ -1.17
CLIP1P30622 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC7.74□□□□□ -1.17
CLIP1P30622 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC7.74□□□□□ -1.17
CLIP1P30622 LDHA-225ENST00000625635 141 ntTSL 5 BASIC7.74□□□□□ -1.17
CLIP1P30622 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC7.74□□□□□ -1.17
CLIP1P30622 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
CLIP1P30622 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
CLIP1P30622 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CLIP1P30622 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CLIP1P30622 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CLIP1P30622 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC7.73□□□□□ -1.17
CLIP1P30622 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
CLIP1P30622 AL590240.1-201ENST00000334118 313 ntBASIC7.73□□□□□ -1.17
CLIP1P30622 SNORA62-201ENST00000365493 153 ntBASIC7.73□□□□□ -1.17
CLIP1P30622 SNORA5.1-201ENST00000384275 131 ntBASIC7.73□□□□□ -1.17
CLIP1P30622 NPM1P36-201ENST00000415681 835 ntBASIC7.73□□□□□ -1.17
CLIP1P30622 LINC00993-201ENST00000420453 540 ntBASIC7.73□□□□□ -1.17
CLIP1P30622 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC7.73□□□□□ -1.17
CLIP1P30622 AL356981.1-201ENST00000454879 684 ntBASIC7.73□□□□□ -1.17
CLIP1P30622 AC245028.2-201ENST00000458673 253 ntBASIC7.73□□□□□ -1.17
CLIP1P30622 AC104971.1-201ENST00000495117 578 ntBASIC7.73□□□□□ -1.17
CLIP1P30622 RNU2-30P-201ENST00000516209 141 ntBASIC7.73□□□□□ -1.17
CLIP1P30622 RN7SKP276-201ENST00000516242 268 ntBASIC7.73□□□□□ -1.17
CLIP1P30622 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC7.73□□□□□ -1.17
CLIP1P30622 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC7.73□□□□□ -1.17
CLIP1P30622 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CLIP1P30622 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC7.73□□□□□ -1.17
CLIP1P30622 AC006349.1-201ENST00000555526 235 ntBASIC7.73□□□□□ -1.17
CLIP1P30622 MIR5699-201ENST00000578903 90 ntBASIC7.73□□□□□ -1.17
CLIP1P30622 AC022726.1-201ENST00000587475 207 ntBASIC7.73□□□□□ -1.17
CLIP1P30622 BX005214.3-202ENST00000619809 325 ntBASIC7.73□□□□□ -1.17
CLIP1P30622 MIR6758-201ENST00000620653 63 ntBASIC7.73□□□□□ -1.17
CLIP1P30622 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CLIP1P30622 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CLIP1P30622 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CLIP1P30622 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CLIP1P30622 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC7.73□□□□□ -1.17
CLIP1P30622 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
CLIP1P30622 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CLIP1P30622 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
CLIP1P30622 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC7.72□□□□□ -1.17
CLIP1P30622 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CLIP1P30622 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC7.72□□□□□ -1.17
CLIP1P30622 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC7.72□□□□□ -1.17
CLIP1P30622 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC7.72□□□□□ -1.17
CLIP1P30622 RPL12P20-201ENST00000475538 479 ntBASIC7.72□□□□□ -1.17
CLIP1P30622 AC111000.3-201ENST00000508057 576 ntBASIC7.72□□□□□ -1.17
CLIP1P30622 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC7.72□□□□□ -1.17
CLIP1P30622 ENPP7P9-201ENST00000514456 627 ntBASIC7.72□□□□□ -1.17
CLIP1P30622 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC7.72□□□□□ -1.17
CLIP1P30622 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC7.72□□□□□ -1.17
CLIP1P30622 MIR4284-201ENST00000578924 81 ntBASIC7.72□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms