Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.12□□□□□ -1.43
POLR2AP24928 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.12□□□□□ -1.43
POLR2AP24928 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC6.12□□□□□ -1.43
POLR2AP24928 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
POLR2AP24928 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
POLR2AP24928 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
POLR2AP24928 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
POLR2AP24928 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
POLR2AP24928 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
POLR2AP24928 KCNMB3P1-202ENST00000493696 3389 ntBASIC6.11□□□□□ -1.43
POLR2AP24928 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
POLR2AP24928 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
POLR2AP24928 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC6.11□□□□□ -1.43
POLR2AP24928 AC004975.1-201ENST00000428733 208 ntBASIC6.11□□□□□ -1.43
POLR2AP24928 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.11□□□□□ -1.43
POLR2AP24928 OR52J1P-201ENST00000450596 932 ntBASIC6.11□□□□□ -1.43
POLR2AP24928 CYCSP42-201ENST00000450823 238 ntBASIC6.11□□□□□ -1.43
POLR2AP24928 AC010733.1-201ENST00000451515 401 ntBASIC6.11□□□□□ -1.43
POLR2AP24928 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC6.11□□□□□ -1.43
POLR2AP24928 AP001960.1-201ENST00000506494 658 ntBASIC6.11□□□□□ -1.43
POLR2AP24928 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC6.11□□□□□ -1.43
POLR2AP24928 RN7SKP21-201ENST00000516503 220 ntBASIC6.11□□□□□ -1.43
POLR2AP24928 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC6.11□□□□□ -1.43
POLR2AP24928 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC6.11□□□□□ -1.43
POLR2AP24928 AP001880.2-201ENST00000538233 448 ntBASIC6.11□□□□□ -1.43
POLR2AP24928 AC012414.2-201ENST00000559474 187 ntBASIC6.11□□□□□ -1.43
POLR2AP24928 AC079148.1-201ENST00000565944 819 ntBASIC6.11□□□□□ -1.43
POLR2AP24928 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC6.11□□□□□ -1.43
POLR2AP24928 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
POLR2AP24928 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.11□□□□□ -1.43
POLR2AP24928 OR52H1-202ENST00000641796 1061 ntBASIC6.11□□□□□ -1.43
POLR2AP24928 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC6.11□□□□□ -1.43
POLR2AP24928 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
POLR2AP24928 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.11□□□□□ -1.43
POLR2AP24928 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.11□□□□□ -1.43
POLR2AP24928 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
POLR2AP24928 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
POLR2AP24928 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
POLR2AP24928 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.11□□□□□ -1.43
POLR2AP24928 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
POLR2AP24928 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC6.11□□□□□ -1.43
POLR2AP24928 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
POLR2AP24928 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
POLR2AP24928 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC6.11□□□□□ -1.43
POLR2AP24928 HIGD1AP15-201ENST00000416198 280 ntBASIC6.11□□□□□ -1.43
POLR2AP24928 RNF10P1-201ENST00000418589 369 ntBASIC6.11□□□□□ -1.43
POLR2AP24928 RPL12P28-201ENST00000430852 489 ntBASIC6.11□□□□□ -1.43
POLR2AP24928 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC6.11□□□□□ -1.43
POLR2AP24928 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC6.11□□□□□ -1.43
POLR2AP24928 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.11□□□□□ -1.43
POLR2AP24928 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC6.11□□□□□ -1.43
POLR2AP24928 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC6.11□□□□□ -1.43
POLR2AP24928 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
POLR2AP24928 AC009963.2-201ENST00000453431 138 ntBASIC6.11□□□□□ -1.43
POLR2AP24928 MTCYBP35-201ENST00000503630 1137 ntBASIC6.11□□□□□ -1.43
POLR2AP24928 AC012400.1-201ENST00000518452 381 ntBASIC6.11□□□□□ -1.43
POLR2AP24928 AC021451.1-201ENST00000523498 1129 ntBASIC6.11□□□□□ -1.43
POLR2AP24928 OR7E13P-201ENST00000526052 910 ntBASIC6.11□□□□□ -1.43
POLR2AP24928 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC6.11□□□□□ -1.43
POLR2AP24928 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
POLR2AP24928 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
POLR2AP24928 AC019322.1-201ENST00000571869 389 ntBASIC6.11□□□□□ -1.43
POLR2AP24928 AC015911.5-201ENST00000587076 451 ntBASIC6.11□□□□□ -1.43
POLR2AP24928 AC110760.3-201ENST00000598794 467 ntBASIC6.11□□□□□ -1.43
POLR2AP24928 AP001521.2-201ENST00000608772 546 ntBASIC6.11□□□□□ -1.43
POLR2AP24928 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC6.11□□□□□ -1.43
POLR2AP24928 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
POLR2AP24928 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.11□□□□□ -1.43
POLR2AP24928 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
POLR2AP24928 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
POLR2AP24928 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC6.11□□□□□ -1.43
POLR2AP24928 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
POLR2AP24928 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
POLR2AP24928 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
POLR2AP24928 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
POLR2AP24928 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC6.1□□□□□ -1.43
POLR2AP24928 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC6.1□□□□□ -1.43
POLR2AP24928 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.1□□□□□ -1.43
POLR2AP24928 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
POLR2AP24928 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.1□□□□□ -1.43
POLR2AP24928 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC6.1□□□□□ -1.43
POLR2AP24928 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
POLR2AP24928 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.1□□□□□ -1.43
POLR2AP24928 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
POLR2AP24928 Y_RNA.126-201ENST00000363382 111 ntBASIC6.1□□□□□ -1.43
POLR2AP24928 SNORD116-2-201ENST00000384274 95 ntBASIC6.1□□□□□ -1.43
POLR2AP24928 SNORD116-6-201ENST00000384711 96 ntBASIC6.1□□□□□ -1.43
POLR2AP24928 MIR122-201ENST00000385044 85 ntBASIC6.1□□□□□ -1.43
POLR2AP24928 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC6.1□□□□□ -1.43
POLR2AP24928 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC6.1□□□□□ -1.43
POLR2AP24928 GTF2IP2-201ENST00000424290 697 ntBASIC6.1□□□□□ -1.43
POLR2AP24928 RPL18P10-201ENST00000425606 538 ntBASIC6.1□□□□□ -1.43
POLR2AP24928 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC6.1□□□□□ -1.43
POLR2AP24928 AL354714.3-201ENST00000447284 493 ntBASIC6.1□□□□□ -1.43
POLR2AP24928 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC6.1□□□□□ -1.43
POLR2AP24928 RPL23AP56-201ENST00000460778 453 ntBASIC6.1□□□□□ -1.43
POLR2AP24928 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC6.1□□□□□ -1.43
POLR2AP24928 AC006427.1-201ENST00000514359 712 ntBASIC6.1□□□□□ -1.43
POLR2AP24928 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC6.1□□□□□ -1.43
POLR2AP24928 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms