Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.06□□□□□ -1.6
HMGA1P17096 ENPP7P9-201ENST00000514456 627 ntBASIC5.06□□□□□ -1.6
HMGA1P17096 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.06□□□□□ -1.6
HMGA1P17096 AC133555.2-201ENST00000550213 292 ntBASIC5.06□□□□□ -1.6
HMGA1P17096 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HMGA1P17096 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.06□□□□□ -1.6
HMGA1P17096 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.06□□□□□ -1.6
HMGA1P17096 MIR5699-201ENST00000578903 90 ntBASIC5.06□□□□□ -1.6
HMGA1P17096 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.06□□□□□ -1.6
HMGA1P17096 AP005432.1-201ENST00000580891 3485 ntBASIC5.06□□□□□ -1.6
HMGA1P17096 AC011447.7-201ENST00000624228 1590 ntBASIC5.06□□□□□ -1.6
HMGA1P17096 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HMGA1P17096 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HMGA1P17096 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.06□□□□□ -1.6
HMGA1P17096 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.06□□□□□ -1.6
HMGA1P17096 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.06□□□□□ -1.6
HMGA1P17096 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
HMGA1P17096 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.06□□□□□ -1.6
HMGA1P17096 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HMGA1P17096 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HMGA1P17096 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
HMGA1P17096 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.05□□□□□ -1.6
HMGA1P17096 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC5.05□□□□□ -1.6
HMGA1P17096 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
HMGA1P17096 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
HMGA1P17096 AC079809.1-201ENST00000415468 276 ntBASIC5.05□□□□□ -1.6
HMGA1P17096 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.05□□□□□ -1.6
HMGA1P17096 AC069213.2-201ENST00000420238 366 ntBASIC5.05□□□□□ -1.6
HMGA1P17096 LINC00993-201ENST00000420453 540 ntBASIC5.05□□□□□ -1.6
HMGA1P17096 FABP7P1-201ENST00000424004 391 ntBASIC5.05□□□□□ -1.6
HMGA1P17096 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.05□□□□□ -1.6
HMGA1P17096 RN7SL354P-201ENST00000469282 294 ntBASIC5.05□□□□□ -1.6
HMGA1P17096 CEACAMP10-202ENST00000495431 496 ntBASIC5.05□□□□□ -1.6
HMGA1P17096 RN7SL558P-201ENST00000497468 299 ntBASIC5.05□□□□□ -1.6
HMGA1P17096 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.05□□□□□ -1.6
HMGA1P17096 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
HMGA1P17096 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.05□□□□□ -1.6
HMGA1P17096 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.05□□□□□ -1.6
HMGA1P17096 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.05□□□□□ -1.6
HMGA1P17096 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.05□□□□□ -1.6
HMGA1P17096 AC140134.1-201ENST00000511830 3544 ntBASIC5.05□□□□□ -1.6
HMGA1P17096 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HMGA1P17096 AC092376.2-201ENST00000622621 4116 ntBASIC5.05□□□□□ -1.6
HMGA1P17096 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
HMGA1P17096 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.05□□□□□ -1.6
HMGA1P17096 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HMGA1P17096 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HMGA1P17096 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.04□□□□□ -1.6
HMGA1P17096 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.04□□□□□ -1.6
HMGA1P17096 AL031123.3-201ENST00000623345 1837 ntBASIC5.04□□□□□ -1.6
HMGA1P17096 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.04□□□□□ -1.6
HMGA1P17096 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HMGA1P17096 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.04□□□□□ -1.6
HMGA1P17096 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HMGA1P17096 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.04□□□□□ -1.6
HMGA1P17096 AC010132.2-201ENST00000295493 1043 ntBASIC5.04□□□□□ -1.6
HMGA1P17096 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HMGA1P17096 SNORA70F-201ENST00000384142 135 ntBASIC5.04□□□□□ -1.6
HMGA1P17096 RNA5SP332-201ENST00000391063 115 ntBASIC5.04□□□□□ -1.6
HMGA1P17096 RPL21P67-201ENST00000402896 478 ntBASIC5.04□□□□□ -1.6
HMGA1P17096 AL049697.2-201ENST00000403708 294 ntBASIC5.04□□□□□ -1.6
HMGA1P17096 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.04□□□□□ -1.6
HMGA1P17096 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.04□□□□□ -1.6
HMGA1P17096 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HMGA1P17096 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.04□□□□□ -1.6
HMGA1P17096 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.04□□□□□ -1.6
HMGA1P17096 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.04□□□□□ -1.6
HMGA1P17096 CEACAMP6-201ENST00000452007 574 ntBASIC5.04□□□□□ -1.6
HMGA1P17096 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.04□□□□□ -1.6
HMGA1P17096 AC093720.1-201ENST00000505681 714 ntBASIC5.04□□□□□ -1.6
HMGA1P17096 AC093815.1-201ENST00000508637 280 ntBASIC5.04□□□□□ -1.6
HMGA1P17096 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HMGA1P17096 Y_RNA.719-201ENST00000517156 106 ntBASIC5.04□□□□□ -1.6
HMGA1P17096 AC087360.1-201ENST00000518788 616 ntBASIC5.04□□□□□ -1.6
HMGA1P17096 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
HMGA1P17096 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HMGA1P17096 AL110118.1-201ENST00000553543 400 ntBASIC5.04□□□□□ -1.6
HMGA1P17096 AF230666.2-201ENST00000602328 725 ntBASIC5.04□□□□□ -1.6
HMGA1P17096 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
HMGA1P17096 AC021106.3-201ENST00000623925 531 ntBASIC5.04□□□□□ -1.6
HMGA1P17096 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
HMGA1P17096 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
HMGA1P17096 AL132640.2-201ENST00000559968 1698 ntBASIC5.04□□□□□ -1.6
HMGA1P17096 AC004656.1-201ENST00000568479 4951 ntBASIC5.04□□□□□ -1.6
HMGA1P17096 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HMGA1P17096 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.04□□□□□ -1.6
HMGA1P17096 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
HMGA1P17096 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.04□□□□□ -1.6
HMGA1P17096 TLK1P1-201ENST00000456760 2440 ntBASIC5.04□□□□□ -1.6
HMGA1P17096 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HMGA1P17096 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HMGA1P17096 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
HMGA1P17096 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HMGA1P17096 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.04□□□□□ -1.6
HMGA1P17096 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HMGA1P17096 AC093297.3-201ENST00000607056 2517 ntBASIC5.03□□□□□ -1.6
HMGA1P17096 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HMGA1P17096 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.03□□□□□ -1.6
HMGA1P17096 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
HMGA1P17096 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms