Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 CGA-206ENST00000630630 832 ntTSL 2 BASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 FP325313.1-201ENST00000638228 703 ntBASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 AC090220.1-201ENST00000593078 1699 ntBASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 RBMY1HP-201ENST00000382759 1389 ntBASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC8.33□□□□□ -1.08
CSB-PGBD3P0DP91 AC006042.3-201ENST00000454684 1469 ntBASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 RPS7P8-201ENST00000418311 581 ntBASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 EIF1P1-201ENST00000421436 341 ntBASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 AC012519.1-201ENST00000424588 610 ntBASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 PCBP2P1-201ENST00000437262 977 ntBASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 IGKV1OR10-1-201ENST00000442306 329 ntBASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 SNRPEP8-201ENST00000442866 260 ntBASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 CALM1P2-201ENST00000452941 448 ntBASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 IGKV1OR22-5-201ENST00000458718 354 ntBASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 AC021074.2-201ENST00000468434 172 ntBASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 MTCO3P38-201ENST00000468910 766 ntBASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 AC104763.1-201ENST00000475274 360 ntBASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 AC095057.1-201ENST00000507583 168 ntBASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 AC026782.2-201ENST00000510845 636 ntBASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 SCARNA18.1-201ENST00000516330 83 ntBASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 snoZ278.1-201ENST00000517059 112 ntBASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 IGHV3-63-201ENST00000518422 341 ntBASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 AL139174.1-201ENST00000531489 886 ntBASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 OR11H3P-201ENST00000554547 982 ntBASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 AC013244.1-201ENST00000604279 193 ntBASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 AL591167.1-201ENST00000607321 456 ntBASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 AL008723.3-201ENST00000608926 449 ntBASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 AP005431.1-201ENST00000618479 319 ntBASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 AL132640.3-201ENST00000630473 177 ntBASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC8.32□□□□□ -1.08
CSB-PGBD3P0DP91 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CSB-PGBD3P0DP91 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CSB-PGBD3P0DP91 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CSB-PGBD3P0DP91 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC8.31□□□□□ -1.08
CSB-PGBD3P0DP91 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC8.31□□□□□ -1.08
CSB-PGBD3P0DP91 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CSB-PGBD3P0DP91 Y_RNA.390-201ENST00000383932 102 ntBASIC8.31□□□□□ -1.08
CSB-PGBD3P0DP91 SNORA40.2-201ENST00000390847 128 ntBASIC8.31□□□□□ -1.08
CSB-PGBD3P0DP91 MIR1203-201ENST00000408812 85 ntBASIC8.31□□□□□ -1.08
CSB-PGBD3P0DP91 NPM1P11-201ENST00000417106 855 ntBASIC8.31□□□□□ -1.08
CSB-PGBD3P0DP91 RPL7P53-201ENST00000421245 739 ntBASIC8.31□□□□□ -1.08
CSB-PGBD3P0DP91 CYCSP52-201ENST00000422857 310 ntBASIC8.31□□□□□ -1.08
CSB-PGBD3P0DP91 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC8.31□□□□□ -1.08
CSB-PGBD3P0DP91 MGAT2P2-201ENST00000427194 797 ntBASIC8.31□□□□□ -1.08
CSB-PGBD3P0DP91 VN1R54P-201ENST00000435210 1049 ntBASIC8.31□□□□□ -1.08
CSB-PGBD3P0DP91 BMS1P10-201ENST00000443754 1120 ntBASIC8.31□□□□□ -1.08
CSB-PGBD3P0DP91 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC8.31□□□□□ -1.08
CSB-PGBD3P0DP91 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC8.31□□□□□ -1.08
CSB-PGBD3P0DP91 YWHAEP1-201ENST00000453697 763 ntBASIC8.31□□□□□ -1.08
CSB-PGBD3P0DP91 ATP5A1P7-201ENST00000453978 1279 ntBASIC8.31□□□□□ -1.08
CSB-PGBD3P0DP91 CDC42P1-201ENST00000456658 548 ntBASIC8.31□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms