Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.08□□□□□ -1.6
RAB40ALP0C0E4 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC5.08□□□□□ -1.6
RAB40ALP0C0E4 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.08□□□□□ -1.6
RAB40ALP0C0E4 AC134349.2-201ENST00000535136 910 ntBASIC5.08□□□□□ -1.6
RAB40ALP0C0E4 NOP56P3-201ENST00000549457 385 ntBASIC5.08□□□□□ -1.6
RAB40ALP0C0E4 AC027176.2-201ENST00000559166 746 ntBASIC5.08□□□□□ -1.6
RAB40ALP0C0E4 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.08□□□□□ -1.6
RAB40ALP0C0E4 AC068020.1-201ENST00000594215 661 ntBASIC5.08□□□□□ -1.6
RAB40ALP0C0E4 AC130352.1-201ENST00000602979 661 ntBASIC5.08□□□□□ -1.6
RAB40ALP0C0E4 AC087763.1-201ENST00000603391 286 ntBASIC5.08□□□□□ -1.6
RAB40ALP0C0E4 AL450270.1-201ENST00000606160 391 ntBASIC5.08□□□□□ -1.6
RAB40ALP0C0E4 AC242628.1-201ENST00000606810 391 ntBASIC5.08□□□□□ -1.6
RAB40ALP0C0E4 AL445222.1-201ENST00000607259 628 ntBASIC5.08□□□□□ -1.6
RAB40ALP0C0E4 AC004948.1-201ENST00000609858 672 ntBASIC5.08□□□□□ -1.6
RAB40ALP0C0E4 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.08□□□□□ -1.6
RAB40ALP0C0E4 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.08□□□□□ -1.6
RAB40ALP0C0E4 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.08□□□□□ -1.6
RAB40ALP0C0E4 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
RAB40ALP0C0E4 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RAB40ALP0C0E4 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
RAB40ALP0C0E4 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RAB40ALP0C0E4 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RAB40ALP0C0E4 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RAB40ALP0C0E4 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
RAB40ALP0C0E4 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.08□□□□□ -1.6
RAB40ALP0C0E4 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 SNORA17.1-201ENST00000362945 126 ntBASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 Y_RNA.110-201ENST00000363220 99 ntBASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 SNORA70.6-201ENST00000383934 134 ntBASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 RNU6-31P-201ENST00000384388 108 ntBASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 SNORA40.4-201ENST00000390971 128 ntBASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 U3.36-201ENST00000408418 213 ntBASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 AL590806.1-201ENST00000415818 853 ntBASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 MGAT2P2-201ENST00000427194 797 ntBASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 AL645937.3-201ENST00000453647 936 ntBASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 PSAT1P4-201ENST00000466500 526 ntBASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 RPL7P40-201ENST00000481703 745 ntBASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 RN7SL97P-201ENST00000486780 299 ntBASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 RPSAP51-201ENST00000497462 645 ntBASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 AC109464.1-201ENST00000511091 819 ntBASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 MTCYBP19-201ENST00000517463 1124 ntBASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 IGHV3-63-201ENST00000518422 341 ntBASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 NMNAT1P5-201ENST00000559657 841 ntBASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 AC106730.2-201ENST00000566641 540 ntBASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 AC005242.1-201ENST00000585658 438 ntBASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 AC006116.3-201ENST00000592968 361 ntBASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 AL671309.1-201ENST00000603750 544 ntBASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 AC007423.1-201ENST00000605009 627 ntBASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 AC005972.3-201ENST00000606304 481 ntBASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 AL162574.1-201ENST00000615702 950 ntBASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 AC025016.1-201ENST00000616746 682 ntBASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 AP000720.1-201ENST00000625091 483 ntBASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 AC068870.3-201ENST00000625077 2536 ntBASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RAB40ALP0C0E4 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RAB40ALP0C0E4 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
RAB40ALP0C0E4 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
RAB40ALP0C0E4 SPATA2P1-201ENST00000431223 2055 ntBASIC5.06□□□□□ -1.6
RAB40ALP0C0E4 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RAB40ALP0C0E4 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RAB40ALP0C0E4 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
RAB40ALP0C0E4 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
RAB40ALP0C0E4 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
RAB40ALP0C0E4 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RAB40ALP0C0E4 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.06□□□□□ -1.6
RAB40ALP0C0E4 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms