Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC008481.1-201ENST00000463278 396 ntBASIC4.61□□□□□ -1.67
SPTA1P02549 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.61□□□□□ -1.67
SPTA1P02549 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SPTA1P02549 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SPTA1P02549 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SPTA1P02549 AC022034.1-201ENST00000512867 2156 ntBASIC4.6□□□□□ -1.67
SPTA1P02549 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.6□□□□□ -1.67
SPTA1P02549 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
SPTA1P02549 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SPTA1P02549 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SPTA1P02549 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SPTA1P02549 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC4.6□□□□□ -1.67
SPTA1P02549 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SPTA1P02549 AC092821.2-201ENST00000545710 2042 ntBASIC4.6□□□□□ -1.67
SPTA1P02549 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC4.6□□□□□ -1.67
SPTA1P02549 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
SPTA1P02549 AL158152.1-201ENST00000602652 1435 ntBASIC4.6□□□□□ -1.67
SPTA1P02549 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SPTA1P02549 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.6□□□□□ -1.67
SPTA1P02549 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.6□□□□□ -1.67
SPTA1P02549 H3F3BP1-201ENST00000440551 403 ntBASIC4.6□□□□□ -1.67
SPTA1P02549 RN7SL188P-201ENST00000469842 285 ntBASIC4.6□□□□□ -1.67
SPTA1P02549 RPL7P19-201ENST00000469948 618 ntBASIC4.6□□□□□ -1.67
SPTA1P02549 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.6□□□□□ -1.67
SPTA1P02549 AC106806.2-201ENST00000509365 500 ntBASIC4.6□□□□□ -1.67
SPTA1P02549 AC093840.1-201ENST00000511599 336 ntBASIC4.6□□□□□ -1.67
SPTA1P02549 GAPDHP62-201ENST00000515313 990 ntBASIC4.6□□□□□ -1.67
SPTA1P02549 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SPTA1P02549 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.6□□□□□ -1.67
SPTA1P02549 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SPTA1P02549 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC4.6□□□□□ -1.67
SPTA1P02549 AC008782.1-201ENST00000603386 430 ntBASIC4.6□□□□□ -1.67
SPTA1P02549 AL133481.2-203ENST00000607558 139 ntBASIC4.6□□□□□ -1.67
SPTA1P02549 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.6□□□□□ -1.67
SPTA1P02549 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.6□□□□□ -1.67
SPTA1P02549 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SPTA1P02549 EBLN2-201ENST00000533473 1679 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
SPTA1P02549 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC4.6□□□□□ -1.67
SPTA1P02549 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SPTA1P02549 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SPTA1P02549 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SPTA1P02549 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.6□□□□□ -1.67
SPTA1P02549 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SPTA1P02549 AL031651.1-201ENST00000615357 1438 ntBASIC4.6□□□□□ -1.67
SPTA1P02549 AL137100.1-201ENST00000556703 1620 ntBASIC4.6□□□□□ -1.67
SPTA1P02549 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SPTA1P02549 AL137058.3-201ENST00000624531 3099 ntBASIC4.6□□□□□ -1.67
SPTA1P02549 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SPTA1P02549 AL590240.1-201ENST00000334118 313 ntBASIC4.6□□□□□ -1.67
SPTA1P02549 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
SPTA1P02549 RNA5SP372-201ENST00000390836 115 ntBASIC4.6□□□□□ -1.67
SPTA1P02549 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SPTA1P02549 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SPTA1P02549 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC4.6□□□□□ -1.67
SPTA1P02549 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC4.6□□□□□ -1.67
SPTA1P02549 AC091912.1-201ENST00000511351 248 ntBASIC4.6□□□□□ -1.67
SPTA1P02549 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
SPTA1P02549 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.6□□□□□ -1.67
SPTA1P02549 DHFRP1-201ENST00000579682 559 ntBASIC4.6□□□□□ -1.67
SPTA1P02549 AP005119.2-201ENST00000579735 1105 ntBASIC4.6□□□□□ -1.67
SPTA1P02549 MIR3158-1-201ENST00000583596 81 ntBASIC4.6□□□□□ -1.67
SPTA1P02549 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.6□□□□□ -1.67
SPTA1P02549 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.6□□□□□ -1.67
SPTA1P02549 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SPTA1P02549 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
SPTA1P02549 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SPTA1P02549 AC068446.1-201ENST00000556425 1549 ntBASIC4.59□□□□□ -1.67
SPTA1P02549 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
SPTA1P02549 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SPTA1P02549 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
SPTA1P02549 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SPTA1P02549 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SPTA1P02549 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
SPTA1P02549 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SPTA1P02549 MIR634-201ENST00000385208 97 ntBASIC4.59□□□□□ -1.67
SPTA1P02549 MIR298-201ENST00000401212 88 ntBASIC4.59□□□□□ -1.67
SPTA1P02549 OR10T1P-201ENST00000424327 947 ntBASIC4.59□□□□□ -1.67
SPTA1P02549 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC4.59□□□□□ -1.67
SPTA1P02549 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.59□□□□□ -1.67
SPTA1P02549 AC114755.5-201ENST00000447760 831 ntBASIC4.59□□□□□ -1.67
SPTA1P02549 CT45A11P-201ENST00000448043 1134 ntBASIC4.59□□□□□ -1.67
SPTA1P02549 PRPF38AP1-201ENST00000451976 933 ntBASIC4.59□□□□□ -1.67
SPTA1P02549 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.59□□□□□ -1.67
SPTA1P02549 AC091564.1-201ENST00000464563 479 ntBASIC4.59□□□□□ -1.67
SPTA1P02549 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
SPTA1P02549 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC4.59□□□□□ -1.67
SPTA1P02549 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.59□□□□□ -1.67
SPTA1P02549 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
SPTA1P02549 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC4.59□□□□□ -1.67
SPTA1P02549 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SPTA1P02549 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
SPTA1P02549 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.59□□□□□ -1.68
SPTA1P02549 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
SPTA1P02549 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
SPTA1P02549 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
SPTA1P02549 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
SPTA1P02549 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC4.59□□□□□ -1.68
SPTA1P02549 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
SPTA1P02549 AL121657.1-201ENST00000327215 531 ntBASIC4.58□□□□□ -1.68
SPTA1P02549 RNU1-94P-201ENST00000362627 173 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms