Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC009643.2-201ENST00000603543 1448 ntBASIC5.92□□□□□ -1.46
COL1A1P02452 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
COL1A1P02452 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.92□□□□□ -1.46
COL1A1P02452 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.92□□□□□ -1.46
COL1A1P02452 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
COL1A1P02452 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
COL1A1P02452 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL1A1P02452 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
COL1A1P02452 AC109446.4-201ENST00000623235 2755 ntBASIC5.92□□□□□ -1.46
COL1A1P02452 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC5.92□□□□□ -1.46
COL1A1P02452 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL1A1P02452 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL1A1P02452 OR4K15-201ENST00000305051 1216 ntBASIC5.92□□□□□ -1.46
COL1A1P02452 ELOCP19-201ENST00000411919 318 ntBASIC5.92□□□□□ -1.46
COL1A1P02452 AC005154.2-201ENST00000438110 379 ntBASIC5.92□□□□□ -1.46
COL1A1P02452 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.92□□□□□ -1.46
COL1A1P02452 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.92□□□□□ -1.46
COL1A1P02452 snoU13.1-201ENST00000459157 104 ntBASIC5.92□□□□□ -1.46
COL1A1P02452 AC093815.1-201ENST00000508637 280 ntBASIC5.92□□□□□ -1.46
COL1A1P02452 RN7SKP276-201ENST00000516242 268 ntBASIC5.92□□□□□ -1.46
COL1A1P02452 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.92□□□□□ -1.46
COL1A1P02452 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.92□□□□□ -1.46
COL1A1P02452 AC068831.8-201ENST00000620171 435 ntBASIC5.92□□□□□ -1.46
COL1A1P02452 AC021106.3-201ENST00000623925 531 ntBASIC5.92□□□□□ -1.46
COL1A1P02452 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
COL1A1P02452 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.92□□□□□ -1.46
COL1A1P02452 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
COL1A1P02452 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
COL1A1P02452 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL1A1P02452 KARSP3-201ENST00000571212 1504 ntBASIC5.92□□□□□ -1.46
COL1A1P02452 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL1A1P02452 AC008758.3-201ENST00000507003 1829 ntBASIC5.92□□□□□ -1.46
COL1A1P02452 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL1A1P02452 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
COL1A1P02452 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COL1A1P02452 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL1A1P02452 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC5.92□□□□□ -1.46
COL1A1P02452 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.91□□□□□ -1.46
COL1A1P02452 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.91□□□□□ -1.46
COL1A1P02452 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.91□□□□□ -1.46
COL1A1P02452 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL1A1P02452 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.91□□□□□ -1.46
COL1A1P02452 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL1A1P02452 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL1A1P02452 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL1A1P02452 SNORA70F-201ENST00000384142 135 ntBASIC5.91□□□□□ -1.46
COL1A1P02452 AC114755.2-201ENST00000413520 361 ntBASIC5.91□□□□□ -1.46
COL1A1P02452 NPM1P36-201ENST00000415681 835 ntBASIC5.91□□□□□ -1.46
COL1A1P02452 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.91□□□□□ -1.46
COL1A1P02452 AC009506.2-201ENST00000420635 840 ntBASIC5.91□□□□□ -1.46
COL1A1P02452 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.91□□□□□ -1.46
COL1A1P02452 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.91□□□□□ -1.46
COL1A1P02452 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.91□□□□□ -1.46
COL1A1P02452 AC108751.3-201ENST00000461814 1020 ntBASIC5.91□□□□□ -1.46
COL1A1P02452 RN7SKP122-201ENST00000515923 296 ntBASIC5.91□□□□□ -1.46
COL1A1P02452 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.91□□□□□ -1.46
COL1A1P02452 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.91□□□□□ -1.46
COL1A1P02452 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.91□□□□□ -1.46
COL1A1P02452 AL110118.1-201ENST00000553543 400 ntBASIC5.91□□□□□ -1.46
COL1A1P02452 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.91□□□□□ -1.46
COL1A1P02452 RN7SL802P-201ENST00000577858 299 ntBASIC5.91□□□□□ -1.46
COL1A1P02452 AC010424.2-201ENST00000607594 443 ntBASIC5.91□□□□□ -1.46
COL1A1P02452 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.91□□□□□ -1.46
COL1A1P02452 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
COL1A1P02452 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
COL1A1P02452 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.91□□□□□ -1.46
COL1A1P02452 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.91□□□□□ -1.46
COL1A1P02452 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
COL1A1P02452 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COL1A1P02452 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.91□□□□□ -1.46
COL1A1P02452 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL1A1P02452 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
COL1A1P02452 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.9□□□□□ -1.46
COL1A1P02452 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.9□□□□□ -1.46
COL1A1P02452 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
COL1A1P02452 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
COL1A1P02452 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.9□□□□□ -1.46
COL1A1P02452 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
COL1A1P02452 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
COL1A1P02452 AC010326.1-201ENST00000462726 602 ntBASIC5.9□□□□□ -1.46
COL1A1P02452 RNU2-30P-201ENST00000516209 141 ntBASIC5.9□□□□□ -1.46
COL1A1P02452 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.9□□□□□ -1.46
COL1A1P02452 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
COL1A1P02452 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.9□□□□□ -1.46
COL1A1P02452 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.9□□□□□ -1.46
COL1A1P02452 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
COL1A1P02452 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
COL1A1P02452 NCLP2-201ENST00000416078 1462 ntBASIC5.9□□□□□ -1.46
COL1A1P02452 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
COL1A1P02452 AC005831.1-201ENST00000624384 1697 ntBASIC5.9□□□□□ -1.46
COL1A1P02452 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
COL1A1P02452 AL031123.3-201ENST00000623345 1837 ntBASIC5.9□□□□□ -1.46
COL1A1P02452 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.46
COL1A1P02452 Z98755.1-201ENST00000407015 1384 ntBASIC5.9□□□□□ -1.47
COL1A1P02452 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
COL1A1P02452 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.9□□□□□ -1.47
COL1A1P02452 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
COL1A1P02452 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
COL1A1P02452 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.9□□□□□ -1.47
COL1A1P02452 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms