Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDGFBP01127 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.32□□□□□ -1.56
PDGFBP01127 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
PDGFBP01127 OR9K1P-202ENST00000641111 3217 ntBASIC5.32□□□□□ -1.56
PDGFBP01127 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
PDGFBP01127 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PDGFBP01127 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.32□□□□□ -1.56
PDGFBP01127 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
PDGFBP01127 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDGFBP01127 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDGFBP01127 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDGFBP01127 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDGFBP01127 AC020656.2-201ENST00000613291 5309 ntBASIC5.31□□□□□ -1.56
PDGFBP01127 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
PDGFBP01127 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDGFBP01127 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.31□□□□□ -1.56
PDGFBP01127 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDGFBP01127 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDGFBP01127 IQCB2P-201ENST00000401788 1633 ntBASIC5.31□□□□□ -1.56
PDGFBP01127 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PDGFBP01127 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDGFBP01127 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
PDGFBP01127 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.31□□□□□ -1.56
PDGFBP01127 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDGFBP01127 RN7SKP227-201ENST00000364445 330 ntBASIC5.31□□□□□ -1.56
PDGFBP01127 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDGFBP01127 NUDT19P3-201ENST00000404698 555 ntBASIC5.31□□□□□ -1.56
PDGFBP01127 AP002530.1-201ENST00000405705 684 ntBASIC5.31□□□□□ -1.56
PDGFBP01127 MIR1182-201ENST00000408363 97 ntBASIC5.31□□□□□ -1.56
PDGFBP01127 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PDGFBP01127 RPS17P17-201ENST00000419392 409 ntBASIC5.31□□□□□ -1.56
PDGFBP01127 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.31□□□□□ -1.56
PDGFBP01127 SETP10-201ENST00000424368 814 ntBASIC5.31□□□□□ -1.56
PDGFBP01127 KCTD10P1-201ENST00000434203 625 ntBASIC5.31□□□□□ -1.56
PDGFBP01127 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.31□□□□□ -1.56
PDGFBP01127 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.31□□□□□ -1.56
PDGFBP01127 AC009963.4-201ENST00000448535 339 ntBASIC5.31□□□□□ -1.56
PDGFBP01127 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.31□□□□□ -1.56
PDGFBP01127 RN7SKP260-201ENST00000516907 149 ntBASIC5.31□□□□□ -1.56
PDGFBP01127 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.31□□□□□ -1.56
PDGFBP01127 AC008676.3-201ENST00000521237 435 ntBASIC5.31□□□□□ -1.56
PDGFBP01127 AC137627.1-201ENST00000545761 289 ntBASIC5.31□□□□□ -1.56
PDGFBP01127 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.31□□□□□ -1.56
PDGFBP01127 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.31□□□□□ -1.56
PDGFBP01127 BNIP3P5-201ENST00000562290 498 ntBASIC5.31□□□□□ -1.56
PDGFBP01127 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.31□□□□□ -1.56
PDGFBP01127 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.31□□□□□ -1.56
PDGFBP01127 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.31□□□□□ -1.56
PDGFBP01127 FAM60CP-201ENST00000591086 664 ntBASIC5.31□□□□□ -1.56
PDGFBP01127 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
PDGFBP01127 AC019193.2-201ENST00000610012 634 ntBASIC5.31□□□□□ -1.56
PDGFBP01127 AC008833.1-201ENST00000611633 691 ntBASIC5.31□□□□□ -1.56
PDGFBP01127 AC107905.1-201ENST00000616204 426 ntBASIC5.31□□□□□ -1.56
PDGFBP01127 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PDGFBP01127 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDGFBP01127 AL137141.1-201ENST00000624622 4836 ntBASIC5.31□□□□□ -1.56
PDGFBP01127 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDGFBP01127 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDGFBP01127 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.31□□□□□ -1.56
PDGFBP01127 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDGFBP01127 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDGFBP01127 AL132640.2-201ENST00000559968 1698 ntBASIC5.31□□□□□ -1.56
PDGFBP01127 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.3□□□□□ -1.56
PDGFBP01127 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
PDGFBP01127 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
PDGFBP01127 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PDGFBP01127 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.3□□□□□ -1.56
PDGFBP01127 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
PDGFBP01127 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PDGFBP01127 VPS35P1-201ENST00000563400 1518 ntBASIC5.3□□□□□ -1.56
PDGFBP01127 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
PDGFBP01127 RNA5SP388-201ENST00000362584 119 ntBASIC5.3□□□□□ -1.56
PDGFBP01127 RNA5SP515-201ENST00000364570 118 ntBASIC5.3□□□□□ -1.56
PDGFBP01127 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PDGFBP01127 MIR23B-201ENST00000384832 97 ntBASIC5.3□□□□□ -1.56
PDGFBP01127 NPM1P37-201ENST00000403105 874 ntBASIC5.3□□□□□ -1.56
PDGFBP01127 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.3□□□□□ -1.56
PDGFBP01127 TRIM60P17-201ENST00000415181 719 ntBASIC5.3□□□□□ -1.56
PDGFBP01127 CENPIP1-201ENST00000425713 902 ntBASIC5.3□□□□□ -1.56
PDGFBP01127 AC234779.1-201ENST00000425910 285 ntBASIC5.3□□□□□ -1.56
PDGFBP01127 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PDGFBP01127 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.3□□□□□ -1.56
PDGFBP01127 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.3□□□□□ -1.56
PDGFBP01127 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.3□□□□□ -1.56
PDGFBP01127 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.3□□□□□ -1.56
PDGFBP01127 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.3□□□□□ -1.56
PDGFBP01127 CDC27P1-201ENST00000445384 715 ntBASIC5.3□□□□□ -1.56
PDGFBP01127 RPL10P17-201ENST00000453852 316 ntBASIC5.3□□□□□ -1.56
PDGFBP01127 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC5.3□□□□□ -1.56
PDGFBP01127 RPL31P53-201ENST00000457065 348 ntBASIC5.3□□□□□ -1.56
PDGFBP01127 RN7SL604P-201ENST00000492589 296 ntBASIC5.3□□□□□ -1.56
PDGFBP01127 AC083829.1-201ENST00000503756 657 ntBASIC5.3□□□□□ -1.56
PDGFBP01127 AC147055.1-201ENST00000509261 750 ntBASIC5.3□□□□□ -1.56
PDGFBP01127 COX6B1P5-201ENST00000509843 249 ntBASIC5.3□□□□□ -1.56
PDGFBP01127 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.3□□□□□ -1.56
PDGFBP01127 AC117525.1-201ENST00000515228 503 ntBASIC5.3□□□□□ -1.56
PDGFBP01127 RN7SKP92-201ENST00000517266 244 ntBASIC5.3□□□□□ -1.56
PDGFBP01127 AC012400.1-201ENST00000518452 381 ntBASIC5.3□□□□□ -1.56
PDGFBP01127 OR5AM1P-201ENST00000532136 1032 ntBASIC5.3□□□□□ -1.56
PDGFBP01127 OR7E128P-201ENST00000532736 1024 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms