Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.54□□□□□ -1.52
CLDN3O15551 MIR4691-201ENST00000583764 85 ntBASIC5.54□□□□□ -1.52
CLDN3O15551 AL627230.1-201ENST00000613077 211 ntBASIC5.54□□□□□ -1.52
CLDN3O15551 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.54□□□□□ -1.52
CLDN3O15551 AC108359.1-201ENST00000616451 1211 ntBASIC5.54□□□□□ -1.52
CLDN3O15551 AL591926.8-201ENST00000616876 211 ntBASIC5.54□□□□□ -1.52
CLDN3O15551 AC090510.2-201ENST00000617465 629 ntBASIC5.54□□□□□ -1.52
CLDN3O15551 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLDN3O15551 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLDN3O15551 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLDN3O15551 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.54□□□□□ -1.52
CLDN3O15551 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.54□□□□□ -1.52
CLDN3O15551 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CLDN3O15551 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLDN3O15551 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLDN3O15551 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLDN3O15551 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLDN3O15551 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CLDN3O15551 AC011755.1-201ENST00000623763 2049 ntBASIC5.53□□□□□ -1.52
CLDN3O15551 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLDN3O15551 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLDN3O15551 AC022417.1-201ENST00000624768 1303 ntBASIC5.53□□□□□ -1.52
CLDN3O15551 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.53□□□□□ -1.52
CLDN3O15551 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLDN3O15551 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.53□□□□□ -1.52
CLDN3O15551 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CLDN3O15551 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLDN3O15551 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.53□□□□□ -1.52
CLDN3O15551 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.53□□□□□ -1.52
CLDN3O15551 AC007394.1-201ENST00000421941 531 ntBASIC5.53□□□□□ -1.52
CLDN3O15551 HMGN2P27-201ENST00000427352 270 ntBASIC5.53□□□□□ -1.52
CLDN3O15551 RBMY2QP-201ENST00000429799 1147 ntBASIC5.53□□□□□ -1.52
CLDN3O15551 BX323845.1-201ENST00000432417 179 ntBASIC5.53□□□□□ -1.52
CLDN3O15551 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.53□□□□□ -1.52
CLDN3O15551 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.53□□□□□ -1.52
CLDN3O15551 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.53□□□□□ -1.52
CLDN3O15551 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.53□□□□□ -1.52
CLDN3O15551 RN7SL610P-201ENST00000463845 291 ntBASIC5.53□□□□□ -1.52
CLDN3O15551 AC008410.1-201ENST00000483777 339 ntBASIC5.53□□□□□ -1.52
CLDN3O15551 NPM1P28-201ENST00000492269 840 ntBASIC5.53□□□□□ -1.52
CLDN3O15551 NIFKP7-201ENST00000503365 834 ntBASIC5.53□□□□□ -1.52
CLDN3O15551 NDUFA5P12-201ENST00000503796 343 ntBASIC5.53□□□□□ -1.52
CLDN3O15551 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.53□□□□□ -1.52
CLDN3O15551 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
CLDN3O15551 SNORA70.11-201ENST00000515987 138 ntBASIC5.53□□□□□ -1.52
CLDN3O15551 SNORA70.13-201ENST00000516116 138 ntBASIC5.53□□□□□ -1.52
CLDN3O15551 SNORD116-30-201ENST00000516468 85 ntBASIC5.53□□□□□ -1.52
CLDN3O15551 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.53□□□□□ -1.52
CLDN3O15551 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.53□□□□□ -1.52
CLDN3O15551 MIR4646-201ENST00000580775 63 ntBASIC5.53□□□□□ -1.52
CLDN3O15551 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.53□□□□□ -1.52
CLDN3O15551 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.53□□□□□ -1.52
CLDN3O15551 AL159169.2-201ENST00000610061 1269 ntBASIC5.53□□□□□ -1.52
CLDN3O15551 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CLDN3O15551 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLDN3O15551 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.53□□□□□ -1.52
CLDN3O15551 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLDN3O15551 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLDN3O15551 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.52□□□□□ -1.53
CLDN3O15551 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
CLDN3O15551 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
CLDN3O15551 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
CLDN3O15551 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLDN3O15551 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLDN3O15551 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.52□□□□□ -1.53
CLDN3O15551 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.52□□□□□ -1.53
CLDN3O15551 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.52□□□□□ -1.53
CLDN3O15551 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.52□□□□□ -1.53
CLDN3O15551 SNORA58B-201ENST00000364259 136 ntBASIC5.52□□□□□ -1.53
CLDN3O15551 Z97832.1-201ENST00000402490 328 ntBASIC5.52□□□□□ -1.53
CLDN3O15551 PSMD10P3-201ENST00000437000 448 ntBASIC5.52□□□□□ -1.53
CLDN3O15551 OR7E125P-201ENST00000443450 846 ntBASIC5.52□□□□□ -1.53
CLDN3O15551 AC021660.1-201ENST00000465006 554 ntBASIC5.52□□□□□ -1.53
CLDN3O15551 AC093270.2-201ENST00000486157 792 ntBASIC5.52□□□□□ -1.53
CLDN3O15551 AC005412.2-201ENST00000492004 341 ntBASIC5.52□□□□□ -1.53
CLDN3O15551 RPL37AP8-201ENST00000494116 276 ntBASIC5.52□□□□□ -1.53
CLDN3O15551 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.52□□□□□ -1.53
CLDN3O15551 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.52□□□□□ -1.53
CLDN3O15551 AP001804.2-201ENST00000533932 910 ntBASIC5.52□□□□□ -1.53
CLDN3O15551 AL121839.1-201ENST00000556233 1185 ntBASIC5.52□□□□□ -1.53
CLDN3O15551 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.52□□□□□ -1.53
CLDN3O15551 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.52□□□□□ -1.53
CLDN3O15551 AC127024.5-201ENST00000580085 462 ntBASIC5.52□□□□□ -1.53
CLDN3O15551 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.52□□□□□ -1.53
CLDN3O15551 AC002069.2-201ENST00000603580 883 ntBASIC5.52□□□□□ -1.53
CLDN3O15551 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.52□□□□□ -1.53
CLDN3O15551 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.52□□□□□ -1.53
CLDN3O15551 AC004817.4-201ENST00000602396 3625 ntBASIC5.52□□□□□ -1.53
CLDN3O15551 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLDN3O15551 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLDN3O15551 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLDN3O15551 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLDN3O15551 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLDN3O15551 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
CLDN3O15551 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CLDN3O15551 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CLDN3O15551 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CLDN3O15551 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CLDN3O15551 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CLDN3O15551 AL645733.1-201ENST00000402250 217 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 164.1 ms