Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 RN7SKP149-201ENST00000363008 344 ntBASIC5.02□□□□□ -1.61
TMX2-CTNND1H3BSU7 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.02□□□□□ -1.61
TMX2-CTNND1H3BSU7 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TMX2-CTNND1H3BSU7 GJA6P-201ENST00000415117 1042 ntBASIC5.02□□□□□ -1.61
TMX2-CTNND1H3BSU7 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.02□□□□□ -1.61
TMX2-CTNND1H3BSU7 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TMX2-CTNND1H3BSU7 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.02□□□□□ -1.61
TMX2-CTNND1H3BSU7 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.02□□□□□ -1.61
TMX2-CTNND1H3BSU7 Z80107.2-201ENST00000445127 392 ntBASIC5.02□□□□□ -1.61
TMX2-CTNND1H3BSU7 TRY2P-201ENST00000448860 689 ntBASIC5.02□□□□□ -1.61
TMX2-CTNND1H3BSU7 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.02□□□□□ -1.61
TMX2-CTNND1H3BSU7 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.02□□□□□ -1.61
TMX2-CTNND1H3BSU7 AC093890.1-201ENST00000502554 540 ntBASIC5.02□□□□□ -1.61
TMX2-CTNND1H3BSU7 IMPA1P1-201ENST00000510718 842 ntBASIC5.02□□□□□ -1.61
TMX2-CTNND1H3BSU7 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.02□□□□□ -1.61
TMX2-CTNND1H3BSU7 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.02□□□□□ -1.61
TMX2-CTNND1H3BSU7 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.02□□□□□ -1.61
TMX2-CTNND1H3BSU7 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.02□□□□□ -1.61
TMX2-CTNND1H3BSU7 AL356752.1-201ENST00000615844 593 ntBASIC5.02□□□□□ -1.61
TMX2-CTNND1H3BSU7 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.02□□□□□ -1.61
TMX2-CTNND1H3BSU7 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.02□□□□□ -1.61
TMX2-CTNND1H3BSU7 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TMX2-CTNND1H3BSU7 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.02□□□□□ -1.61
TMX2-CTNND1H3BSU7 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
TMX2-CTNND1H3BSU7 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.02□□□□□ -1.61
TMX2-CTNND1H3BSU7 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TMX2-CTNND1H3BSU7 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.02□□□□□ -1.61
TMX2-CTNND1H3BSU7 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TMX2-CTNND1H3BSU7 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.02□□□□□ -1.61
TMX2-CTNND1H3BSU7 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TMX2-CTNND1H3BSU7 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
TMX2-CTNND1H3BSU7 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
TMX2-CTNND1H3BSU7 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TMX2-CTNND1H3BSU7 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TMX2-CTNND1H3BSU7 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
TMX2-CTNND1H3BSU7 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
TMX2-CTNND1H3BSU7 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
TMX2-CTNND1H3BSU7 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TMX2-CTNND1H3BSU7 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TMX2-CTNND1H3BSU7 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.01□□□□□ -1.61
TMX2-CTNND1H3BSU7 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.01□□□□□ -1.61
TMX2-CTNND1H3BSU7 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
TMX2-CTNND1H3BSU7 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
TMX2-CTNND1H3BSU7 RNU1-146P-201ENST00000364015 165 ntBASIC5.01□□□□□ -1.61
TMX2-CTNND1H3BSU7 RN7SKP153-201ENST00000365026 316 ntBASIC5.01□□□□□ -1.61
TMX2-CTNND1H3BSU7 OR1L6-202ENST00000373684 1044 ntBASIC5.01□□□□□ -1.61
TMX2-CTNND1H3BSU7 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
TMX2-CTNND1H3BSU7 EI24P3-201ENST00000399046 1062 ntBASIC5.01□□□□□ -1.61
TMX2-CTNND1H3BSU7 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.01□□□□□ -1.61
TMX2-CTNND1H3BSU7 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC5.01□□□□□ -1.61
TMX2-CTNND1H3BSU7 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC5.01□□□□□ -1.61
TMX2-CTNND1H3BSU7 HSPD1P12-201ENST00000429127 1069 ntBASIC5.01□□□□□ -1.61
TMX2-CTNND1H3BSU7 RPL7AP49-201ENST00000429522 581 ntBASIC5.01□□□□□ -1.61
TMX2-CTNND1H3BSU7 FTLP19-201ENST00000433300 394 ntBASIC5.01□□□□□ -1.61
TMX2-CTNND1H3BSU7 AL591438.1-201ENST00000433508 581 ntBASIC5.01□□□□□ -1.61
TMX2-CTNND1H3BSU7 CEACAMP9-201ENST00000442990 513 ntBASIC5.01□□□□□ -1.61
TMX2-CTNND1H3BSU7 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.01□□□□□ -1.61
TMX2-CTNND1H3BSU7 snoU13.20-201ENST00000459180 104 ntBASIC5.01□□□□□ -1.61
TMX2-CTNND1H3BSU7 AC006463.2-201ENST00000473326 348 ntBASIC5.01□□□□□ -1.61
TMX2-CTNND1H3BSU7 AC058823.1-201ENST00000485315 474 ntBASIC5.01□□□□□ -1.61
TMX2-CTNND1H3BSU7 HMGN2P25-201ENST00000486956 268 ntBASIC5.01□□□□□ -1.61
TMX2-CTNND1H3BSU7 AL049874.2-201ENST00000492636 288 ntBASIC5.01□□□□□ -1.61
TMX2-CTNND1H3BSU7 RPS24P16-201ENST00000497294 392 ntBASIC5.01□□□□□ -1.61
TMX2-CTNND1H3BSU7 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.01□□□□□ -1.61
TMX2-CTNND1H3BSU7 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.01□□□□□ -1.61
TMX2-CTNND1H3BSU7 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.01□□□□□ -1.61
TMX2-CTNND1H3BSU7 RNA5SP464-201ENST00000516251 108 ntBASIC5.01□□□□□ -1.61
TMX2-CTNND1H3BSU7 AC008033.2-201ENST00000542626 177 ntBASIC5.01□□□□□ -1.61
TMX2-CTNND1H3BSU7 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.01□□□□□ -1.61
TMX2-CTNND1H3BSU7 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
TMX2-CTNND1H3BSU7 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.01□□□□□ -1.61
TMX2-CTNND1H3BSU7 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.01□□□□□ -1.61
TMX2-CTNND1H3BSU7 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TMX2-CTNND1H3BSU7 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
TMX2-CTNND1H3BSU7 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TMX2-CTNND1H3BSU7 SDAD1P1-202ENST00000524156 2051 ntBASIC5.01□□□□□ -1.61
TMX2-CTNND1H3BSU7 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
TMX2-CTNND1H3BSU7 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TMX2-CTNND1H3BSU7 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TMX2-CTNND1H3BSU7 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
TMX2-CTNND1H3BSU7 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TMX2-CTNND1H3BSU7 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5□□□□□ -1.61
TMX2-CTNND1H3BSU7 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5□□□□□ -1.61
TMX2-CTNND1H3BSU7 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5□□□□□ -1.61
TMX2-CTNND1H3BSU7 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5□□□□□ -1.61
TMX2-CTNND1H3BSU7 BMPR1APS1-201ENST00000403332 1598 ntBASIC5□□□□□ -1.61
TMX2-CTNND1H3BSU7 AC011447.7-201ENST00000624228 1590 ntBASIC5□□□□□ -1.61
TMX2-CTNND1H3BSU7 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TMX2-CTNND1H3BSU7 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5□□□□□ -1.61
TMX2-CTNND1H3BSU7 AC007996.1-201ENST00000620414 2821 ntBASIC5□□□□□ -1.61
TMX2-CTNND1H3BSU7 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC5□□□□□ -1.61
TMX2-CTNND1H3BSU7 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5□□□□□ -1.61
TMX2-CTNND1H3BSU7 RN7SKP104-201ENST00000362605 328 ntBASIC5□□□□□ -1.61
TMX2-CTNND1H3BSU7 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TMX2-CTNND1H3BSU7 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
TMX2-CTNND1H3BSU7 RNA5SP87-201ENST00000384155 118 ntBASIC5□□□□□ -1.61
TMX2-CTNND1H3BSU7 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5□□□□□ -1.61
TMX2-CTNND1H3BSU7 AL360081.1-201ENST00000428299 555 ntBASIC5□□□□□ -1.61
TMX2-CTNND1H3BSU7 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5□□□□□ -1.61
TMX2-CTNND1H3BSU7 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms