Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC044797.1-201ENST00000445744 679 ntBASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 AC105399.1-202ENST00000447303 205 ntBASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 AL157827.1-201ENST00000447622 132 ntBASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 AC104634.1-201ENST00000452720 462 ntBASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 snoU109.3-201ENST00000459477 145 ntBASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 AC104982.1-201ENST00000478775 574 ntBASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 PRELID3BP6-201ENST00000503839 571 ntBASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 MYL12BP2-201ENST00000503948 512 ntBASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 AC074087.1-201ENST00000512059 724 ntBASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 MTND2P32-201ENST00000521584 1038 ntBASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 ZKSCAN7P1-201ENST00000543668 673 ntBASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 AC022884.2-201ENST00000578535 580 ntBASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 RBM22P1-201ENST00000578589 1214 ntBASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 AL162431.4-201ENST00000604674 411 ntBASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 AL159169.2-201ENST00000610061 1269 ntBASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 AC105105.5-201ENST00000622635 1294 ntBASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 RPL23AP61-201ENST00000623642 466 ntBASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 AC126544.2-201ENST00000625174 749 ntBASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 AC106754.1-201ENST00000562632 1513 ntBASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 MTND5P11-201ENST00000511037 1812 ntBASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 SPATA2P1-201ENST00000431223 2055 ntBASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 AC005261.2-201ENST00000593427 4258 ntBASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 TRIM51GP-201ENST00000534741 1350 ntBASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 AC011755.1-201ENST00000623763 2049 ntBASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 RNA5SP122-201ENST00000384457 108 ntBASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 MIR589-201ENST00000385238 99 ntBASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 RNA5SP105-201ENST00000391123 113 ntBASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 OR2AT2P-201ENST00000413438 905 ntBASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 TNPO1P1-201ENST00000423641 1138 ntBASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 AC090018.1-201ENST00000434369 367 ntBASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 RRM2P4-201ENST00000441721 562 ntBASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 CYCSP51-201ENST00000443545 318 ntBASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 GAPDHP14-201ENST00000450472 937 ntBASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 HMGB1P26-201ENST00000452520 628 ntBASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 AC007998.1-201ENST00000474156 672 ntBASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 AC116562.1-201ENST00000485355 781 ntBASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 RN7SL423P-201ENST00000486202 304 ntBASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 PFN1P8-201ENST00000497012 543 ntBASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 RN7SKP99-201ENST00000517028 307 ntBASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 OR5D2P-201ENST00000524390 911 ntBASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 AC087894.1-201ENST00000538359 518 ntBASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 MTND1P24-201ENST00000552175 861 ntBASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 MIR1273E-201ENST00000581165 102 ntBASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 MIR4505-201ENST00000582238 73 ntBASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 BNIP3P38-201ENST00000601117 544 ntBASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 AC112503.1-201ENST00000608436 391 ntBASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 AC124016.2-201ENST00000610058 665 ntBASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
TCRBV7S3A2A0A539 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.4□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 147.1 ms