Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 BTF3P6-201ENST00000448054 499 ntBASIC4.56□□□□□ -1.68
RHBDD3Q9Y3P4 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.56□□□□□ -1.68
RHBDD3Q9Y3P4 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.56□□□□□ -1.68
RHBDD3Q9Y3P4 OR6C72P-201ENST00000451403 892 ntBASIC4.56□□□□□ -1.68
RHBDD3Q9Y3P4 DNAJB5P1-201ENST00000454004 806 ntBASIC4.56□□□□□ -1.68
RHBDD3Q9Y3P4 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.56□□□□□ -1.68
RHBDD3Q9Y3P4 AC105918.1-201ENST00000474399 838 ntBASIC4.56□□□□□ -1.68
RHBDD3Q9Y3P4 RN7SL717P-201ENST00000478343 297 ntBASIC4.56□□□□□ -1.68
RHBDD3Q9Y3P4 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
RHBDD3Q9Y3P4 COX6B1P2-201ENST00000489624 230 ntBASIC4.56□□□□□ -1.68
RHBDD3Q9Y3P4 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.56□□□□□ -1.68
RHBDD3Q9Y3P4 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.56□□□□□ -1.68
RHBDD3Q9Y3P4 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.56□□□□□ -1.68
RHBDD3Q9Y3P4 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.56□□□□□ -1.68
RHBDD3Q9Y3P4 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.56□□□□□ -1.68
RHBDD3Q9Y3P4 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.56□□□□□ -1.68
RHBDD3Q9Y3P4 HMGB1P40-201ENST00000525121 540 ntBASIC4.56□□□□□ -1.68
RHBDD3Q9Y3P4 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.56□□□□□ -1.68
RHBDD3Q9Y3P4 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC4.56□□□□□ -1.68
RHBDD3Q9Y3P4 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.56□□□□□ -1.68
RHBDD3Q9Y3P4 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC4.56□□□□□ -1.68
RHBDD3Q9Y3P4 SNORD95-201ENST00000579879 68 ntBASIC4.56□□□□□ -1.68
RHBDD3Q9Y3P4 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.56□□□□□ -1.68
RHBDD3Q9Y3P4 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.56□□□□□ -1.68
RHBDD3Q9Y3P4 SUGT1P3-202ENST00000604259 383 ntBASIC4.56□□□□□ -1.68
RHBDD3Q9Y3P4 AC005252.1-201ENST00000604518 1063 ntBASIC4.56□□□□□ -1.68
RHBDD3Q9Y3P4 SNORA17.5-201ENST00000630429 132 ntBASIC4.56□□□□□ -1.68
RHBDD3Q9Y3P4 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.56□□□□□ -1.68
RHBDD3Q9Y3P4 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RHBDD3Q9Y3P4 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
RHBDD3Q9Y3P4 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.56□□□□□ -1.68
RHBDD3Q9Y3P4 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RHBDD3Q9Y3P4 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RHBDD3Q9Y3P4 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
RHBDD3Q9Y3P4 AC023421.1-201ENST00000590535 1785 ntBASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 HSPD1P11-201ENST00000508643 1702 ntBASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 CASC19-221ENST00000641309 1382 ntBASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 AC025574.1-201ENST00000554784 1653 ntBASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 AC007342.7-201ENST00000624610 2337 ntBASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 PHKBP1-201ENST00000450951 1951 ntBASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 AC092079.1-201ENST00000558620 1985 ntBASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 AL731532.2-201ENST00000623542 1953 ntBASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 MIR365B-201ENST00000362317 111 ntBASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 RPL10P10-201ENST00000403509 664 ntBASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 RNA5SP487-201ENST00000410186 122 ntBASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 RNU2-50P-201ENST00000410494 143 ntBASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 CTSL3P-202ENST00000412179 788 ntBASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 MARK2P12-201ENST00000420129 585 ntBASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 AL590609.2-201ENST00000421430 368 ntBASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 RPL23AP4-201ENST00000427757 463 ntBASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 MTND2P2-201ENST00000434633 945 ntBASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 AL353597.2-202ENST00000434901 373 ntBASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 AC012512.1-201ENST00000446594 718 ntBASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 PTMAP3-201ENST00000447474 330 ntBASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 AC104634.1-201ENST00000452720 462 ntBASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 RPL7P45-201ENST00000455851 743 ntBASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 RN7SL547P-201ENST00000490793 290 ntBASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 AC023424.1-201ENST00000496058 459 ntBASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 RN7SL591P-201ENST00000496150 292 ntBASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 AC008814.1-201ENST00000603797 406 ntBASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 AL589674.2-201ENST00000604304 337 ntBASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 AC004477.3-201ENST00000614061 590 ntBASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 AP005212.4-201ENST00000614206 710 ntBASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 AC108359.1-201ENST00000616451 1211 ntBASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 BNIP3P41-202ENST00000616656 861 ntBASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
RHBDD3Q9Y3P4 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms