Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC88CQ9P219 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
CCDC88CQ9P219 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC88CQ9P219 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC88CQ9P219 SNORA51.8-201ENST00000384234 132 ntBASIC4.77□□□□□ -1.65
CCDC88CQ9P219 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CCDC88CQ9P219 AL133270.1-201ENST00000402635 279 ntBASIC4.77□□□□□ -1.65
CCDC88CQ9P219 AP002530.1-201ENST00000405705 684 ntBASIC4.77□□□□□ -1.65
CCDC88CQ9P219 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC88CQ9P219 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC88CQ9P219 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.77□□□□□ -1.65
CCDC88CQ9P219 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC88CQ9P219 AC093827.1-201ENST00000480094 861 ntBASIC4.77□□□□□ -1.65
CCDC88CQ9P219 DEFB109A-201ENST00000482450 265 ntBASIC4.77□□□□□ -1.65
CCDC88CQ9P219 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC88CQ9P219 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC4.77□□□□□ -1.65
CCDC88CQ9P219 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC88CQ9P219 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.77□□□□□ -1.65
CCDC88CQ9P219 OR5D2P-201ENST00000524390 911 ntBASIC4.77□□□□□ -1.65
CCDC88CQ9P219 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC88CQ9P219 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.77□□□□□ -1.65
CCDC88CQ9P219 NMNAT1P1-201ENST00000554095 876 ntBASIC4.77□□□□□ -1.65
CCDC88CQ9P219 MIR4270-201ENST00000581799 70 ntBASIC4.77□□□□□ -1.65
CCDC88CQ9P219 AC010487.1-201ENST00000594408 1172 ntBASIC4.77□□□□□ -1.65
CCDC88CQ9P219 AL391358.1-201ENST00000605342 190 ntBASIC4.77□□□□□ -1.65
CCDC88CQ9P219 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC88CQ9P219 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.77□□□□□ -1.65
CCDC88CQ9P219 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC88CQ9P219 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC4.76□□□□□ -1.65
CCDC88CQ9P219 AC104623.2-202ENST00000623477 4002 ntBASIC4.76□□□□□ -1.65
CCDC88CQ9P219 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC88CQ9P219 MFSD8-216ENST00000641147 4009 ntBASIC4.76□□□□□ -1.65
CCDC88CQ9P219 AC008079.2-201ENST00000623543 20396 ntBASIC4.76□□□□□ -1.65
CCDC88CQ9P219 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.76□□□□□ -1.65
CCDC88CQ9P219 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
CCDC88CQ9P219 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
CCDC88CQ9P219 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
CCDC88CQ9P219 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC88CQ9P219 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC88CQ9P219 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CCDC88CQ9P219 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC88CQ9P219 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CCDC88CQ9P219 RNA5SP345-201ENST00000410646 108 ntBASIC4.76□□□□□ -1.65
CCDC88CQ9P219 RSU1P3-201ENST00000412878 835 ntBASIC4.76□□□□□ -1.65
CCDC88CQ9P219 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC88CQ9P219 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC88CQ9P219 NIPA2P1-201ENST00000426223 976 ntBASIC4.76□□□□□ -1.65
CCDC88CQ9P219 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC88CQ9P219 RPL31P44-201ENST00000447680 377 ntBASIC4.76□□□□□ -1.65
CCDC88CQ9P219 RN7SL860P-201ENST00000473738 223 ntBASIC4.76□□□□□ -1.65
CCDC88CQ9P219 AC026782.2-201ENST00000510845 636 ntBASIC4.76□□□□□ -1.65
CCDC88CQ9P219 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC88CQ9P219 AC068993.1-201ENST00000546724 589 ntBASIC4.76□□□□□ -1.65
CCDC88CQ9P219 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CCDC88CQ9P219 AC018552.1-201ENST00000562099 811 ntBASIC4.76□□□□□ -1.65
CCDC88CQ9P219 MEMO1P5-201ENST00000604810 406 ntBASIC4.76□□□□□ -1.65
CCDC88CQ9P219 MIR6758-201ENST00000620653 63 ntBASIC4.76□□□□□ -1.65
CCDC88CQ9P219 AC073342.3-201ENST00000624211 193 ntBASIC4.76□□□□□ -1.65
CCDC88CQ9P219 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.76□□□□□ -1.65
CCDC88CQ9P219 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC88CQ9P219 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.76□□□□□ -1.65
CCDC88CQ9P219 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.76□□□□□ -1.65
CCDC88CQ9P219 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC88CQ9P219 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC88CQ9P219 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC88CQ9P219 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.76□□□□□ -1.65
CCDC88CQ9P219 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CCDC88CQ9P219 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.76□□□□□ -1.65
CCDC88CQ9P219 AL360270.2-201ENST00000562952 5985 ntBASIC4.76□□□□□ -1.65
CCDC88CQ9P219 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC88CQ9P219 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
CCDC88CQ9P219 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC88CQ9P219 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CCDC88CQ9P219 SNORA77-201ENST00000408716 125 ntBASIC4.75□□□□□ -1.65
CCDC88CQ9P219 Y_RNA.625-201ENST00000411256 107 ntBASIC4.75□□□□□ -1.65
CCDC88CQ9P219 TXNP5-201ENST00000441043 315 ntBASIC4.75□□□□□ -1.65
CCDC88CQ9P219 AC022133.1-201ENST00000490961 571 ntBASIC4.75□□□□□ -1.65
CCDC88CQ9P219 AC116553.2-201ENST00000564203 463 ntBASIC4.75□□□□□ -1.65
CCDC88CQ9P219 CYCSP40-201ENST00000575927 294 ntBASIC4.75□□□□□ -1.65
CCDC88CQ9P219 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC88CQ9P219 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC88CQ9P219 AC008745.1-201ENST00000604064 271 ntBASIC4.75□□□□□ -1.65
CCDC88CQ9P219 BNIP3P35-201ENST00000604530 490 ntBASIC4.75□□□□□ -1.65
CCDC88CQ9P219 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC88CQ9P219 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC88CQ9P219 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC88CQ9P219 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC88CQ9P219 AC000374.1-201ENST00000434698 1745 ntBASIC4.75□□□□□ -1.65
CCDC88CQ9P219 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
CCDC88CQ9P219 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC88CQ9P219 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC88CQ9P219 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC88CQ9P219 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CCDC88CQ9P219 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC88CQ9P219 GJA6P-201ENST00000415117 1042 ntBASIC4.75□□□□□ -1.65
CCDC88CQ9P219 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC88CQ9P219 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC88CQ9P219 HMGN2P27-201ENST00000427352 270 ntBASIC4.75□□□□□ -1.65
CCDC88CQ9P219 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC88CQ9P219 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms