Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC022832.1-201ENST00000530718 645 ntBASIC4.97□□□□□ -1.61
TREX1Q9NSU2 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.97□□□□□ -1.61
TREX1Q9NSU2 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TREX1Q9NSU2 MIR4691-201ENST00000583764 85 ntBASIC4.97□□□□□ -1.61
TREX1Q9NSU2 EIF1P5-201ENST00000585002 234 ntBASIC4.97□□□□□ -1.61
TREX1Q9NSU2 AL049794.2-201ENST00000616301 365 ntBASIC4.97□□□□□ -1.61
TREX1Q9NSU2 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC4.97□□□□□ -1.61
TREX1Q9NSU2 AC087821.1-201ENST00000623639 567 ntBASIC4.97□□□□□ -1.61
TREX1Q9NSU2 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC4.97□□□□□ -1.61
TREX1Q9NSU2 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
TREX1Q9NSU2 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.97□□□□□ -1.61
TREX1Q9NSU2 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
TREX1Q9NSU2 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TREX1Q9NSU2 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TREX1Q9NSU2 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TREX1Q9NSU2 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.97□□□□□ -1.61
TREX1Q9NSU2 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TREX1Q9NSU2 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TREX1Q9NSU2 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.97□□□□□ -1.61
TREX1Q9NSU2 AL590763.1-201ENST00000398297 1545 ntBASIC4.97□□□□□ -1.61
TREX1Q9NSU2 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
TREX1Q9NSU2 AC009643.2-201ENST00000603543 1448 ntBASIC4.97□□□□□ -1.61
TREX1Q9NSU2 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.96□□□□□ -1.61
TREX1Q9NSU2 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
TREX1Q9NSU2 AC025574.1-201ENST00000554784 1653 ntBASIC4.96□□□□□ -1.61
TREX1Q9NSU2 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.96□□□□□ -1.61
TREX1Q9NSU2 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TREX1Q9NSU2 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
TREX1Q9NSU2 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.96□□□□□ -1.62
TREX1Q9NSU2 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.96□□□□□ -1.62
TREX1Q9NSU2 AC097461.1-201ENST00000568928 2821 ntBASIC4.96□□□□□ -1.62
TREX1Q9NSU2 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
TREX1Q9NSU2 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
TREX1Q9NSU2 AC005522.1-201ENST00000395416 346 ntBASIC4.96□□□□□ -1.62
TREX1Q9NSU2 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.96□□□□□ -1.62
TREX1Q9NSU2 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.96□□□□□ -1.62
TREX1Q9NSU2 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.96□□□□□ -1.62
TREX1Q9NSU2 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.96□□□□□ -1.62
TREX1Q9NSU2 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.96□□□□□ -1.62
TREX1Q9NSU2 AURKAPS1-201ENST00000451805 1212 ntBASIC4.96□□□□□ -1.62
TREX1Q9NSU2 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.96□□□□□ -1.62
TREX1Q9NSU2 RN7SL727P-201ENST00000482164 296 ntBASIC4.96□□□□□ -1.62
TREX1Q9NSU2 AC069304.1-201ENST00000491593 704 ntBASIC4.96□□□□□ -1.62
TREX1Q9NSU2 HMGB3P16-201ENST00000508037 287 ntBASIC4.96□□□□□ -1.62
TREX1Q9NSU2 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.96□□□□□ -1.62
TREX1Q9NSU2 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.96□□□□□ -1.62
TREX1Q9NSU2 AC090022.1-201ENST00000546569 311 ntBASIC4.96□□□□□ -1.62
TREX1Q9NSU2 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.96□□□□□ -1.62
TREX1Q9NSU2 AC009852.2-201ENST00000567898 485 ntBASIC4.96□□□□□ -1.62
TREX1Q9NSU2 AP002884.5-201ENST00000595053 1132 ntBASIC4.96□□□□□ -1.62
TREX1Q9NSU2 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.96□□□□□ -1.62
TREX1Q9NSU2 SUMO2P15-201ENST00000604285 278 ntBASIC4.96□□□□□ -1.62
TREX1Q9NSU2 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC4.96□□□□□ -1.62
TREX1Q9NSU2 AC087783.2-201ENST00000605070 562 ntBASIC4.96□□□□□ -1.62
TREX1Q9NSU2 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
TREX1Q9NSU2 MIR6886-201ENST00000619864 61 ntBASIC4.96□□□□□ -1.62
TREX1Q9NSU2 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.96□□□□□ -1.62
TREX1Q9NSU2 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TREX1Q9NSU2 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.96□□□□□ -1.62
TREX1Q9NSU2 FGG-205ENST00000407946 1636 ntTSL 5 BASIC4.96□□□□□ -1.62
TREX1Q9NSU2 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.96□□□□□ -1.62
TREX1Q9NSU2 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.96□□□□□ -1.62
TREX1Q9NSU2 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
TREX1Q9NSU2 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.96□□□□□ -1.62
TREX1Q9NSU2 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.96□□□□□ -1.62
TREX1Q9NSU2 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TREX1Q9NSU2 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TREX1Q9NSU2 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TREX1Q9NSU2 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.95□□□□□ -1.62
TREX1Q9NSU2 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TREX1Q9NSU2 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.95□□□□□ -1.62
TREX1Q9NSU2 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.95□□□□□ -1.62
TREX1Q9NSU2 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TREX1Q9NSU2 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.95□□□□□ -1.62
TREX1Q9NSU2 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TREX1Q9NSU2 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TREX1Q9NSU2 RPL23P2-201ENST00000320371 421 ntBASIC4.95□□□□□ -1.62
TREX1Q9NSU2 RNA5SP428-201ENST00000365129 132 ntBASIC4.95□□□□□ -1.62
TREX1Q9NSU2 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
TREX1Q9NSU2 RNU1-106P-201ENST00000384382 164 ntBASIC4.95□□□□□ -1.62
TREX1Q9NSU2 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
TREX1Q9NSU2 AL121878.1-201ENST00000418638 859 ntBASIC4.95□□□□□ -1.62
TREX1Q9NSU2 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.95□□□□□ -1.62
TREX1Q9NSU2 OR2AH1P-201ENST00000425717 928 ntBASIC4.95□□□□□ -1.62
TREX1Q9NSU2 NPM1P22-201ENST00000427761 952 ntBASIC4.95□□□□□ -1.62
TREX1Q9NSU2 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.95□□□□□ -1.62
TREX1Q9NSU2 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.95□□□□□ -1.62
TREX1Q9NSU2 RPS18P6-201ENST00000476880 458 ntBASIC4.95□□□□□ -1.62
TREX1Q9NSU2 RPL5P22-201ENST00000480199 884 ntBASIC4.95□□□□□ -1.62
TREX1Q9NSU2 RN7SL244P-201ENST00000493405 297 ntBASIC4.95□□□□□ -1.62
TREX1Q9NSU2 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.95□□□□□ -1.62
TREX1Q9NSU2 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.95□□□□□ -1.62
TREX1Q9NSU2 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TREX1Q9NSU2 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.95□□□□□ -1.62
TREX1Q9NSU2 RFPL4AP3-201ENST00000515267 345 ntBASIC4.95□□□□□ -1.62
TREX1Q9NSU2 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.95□□□□□ -1.62
TREX1Q9NSU2 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC4.95□□□□□ -1.62
TREX1Q9NSU2 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TREX1Q9NSU2 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.95□□□□□ -1.62
TREX1Q9NSU2 AC092490.3-201ENST00000545370 572 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms