Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
TRIM4Q9C037 AL138820.1-201ENST00000617901 5305 ntBASIC5.29□□□□□ -1.56
TRIM4Q9C037 TET1P1-201ENST00000426627 2301 ntBASIC5.29□□□□□ -1.56
TRIM4Q9C037 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM4Q9C037 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM4Q9C037 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
TRIM4Q9C037 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.28□□□□□ -1.56
TRIM4Q9C037 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM4Q9C037 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM4Q9C037 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM4Q9C037 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM4Q9C037 AC026951.1-201ENST00000559530 2459 ntBASIC5.28□□□□□ -1.56
TRIM4Q9C037 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.28□□□□□ -1.56
TRIM4Q9C037 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM4Q9C037 AL035419.1-201ENST00000397037 564 ntBASIC5.28□□□□□ -1.56
TRIM4Q9C037 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.28□□□□□ -1.56
TRIM4Q9C037 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC5.28□□□□□ -1.56
TRIM4Q9C037 OR2AH1P-201ENST00000425717 928 ntBASIC5.28□□□□□ -1.56
TRIM4Q9C037 C4BPAP2-201ENST00000428434 478 ntBASIC5.28□□□□□ -1.56
TRIM4Q9C037 AL022331.1-201ENST00000429025 477 ntBASIC5.28□□□□□ -1.56
TRIM4Q9C037 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.28□□□□□ -1.56
TRIM4Q9C037 AL049745.1-201ENST00000433953 286 ntBASIC5.28□□□□□ -1.56
TRIM4Q9C037 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.28□□□□□ -1.56
TRIM4Q9C037 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.28□□□□□ -1.56
TRIM4Q9C037 AC021106.1-201ENST00000509020 1058 ntBASIC5.28□□□□□ -1.56
TRIM4Q9C037 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.28□□□□□ -1.56
TRIM4Q9C037 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.28□□□□□ -1.56
TRIM4Q9C037 MRPS16P1-201ENST00000523462 412 ntBASIC5.28□□□□□ -1.56
TRIM4Q9C037 AC006349.1-201ENST00000555526 235 ntBASIC5.28□□□□□ -1.56
TRIM4Q9C037 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.28□□□□□ -1.56
TRIM4Q9C037 AC084759.1-201ENST00000561168 290 ntBASIC5.28□□□□□ -1.56
TRIM4Q9C037 AC018552.1-201ENST00000562099 811 ntBASIC5.28□□□□□ -1.56
TRIM4Q9C037 MIR4260-201ENST00000583107 67 ntBASIC5.28□□□□□ -1.56
TRIM4Q9C037 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.28□□□□□ -1.56
TRIM4Q9C037 AC126915.2-201ENST00000610957 190 ntBASIC5.28□□□□□ -1.56
TRIM4Q9C037 AC010435.1-201ENST00000623353 1177 ntBASIC5.28□□□□□ -1.56
TRIM4Q9C037 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM4Q9C037 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.28□□□□□ -1.56
TRIM4Q9C037 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.28□□□□□ -1.56
TRIM4Q9C037 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM4Q9C037 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.28□□□□□ -1.56
TRIM4Q9C037 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.28□□□□□ -1.56
TRIM4Q9C037 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
TRIM4Q9C037 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
TRIM4Q9C037 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
TRIM4Q9C037 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.27□□□□□ -1.57
TRIM4Q9C037 AC007996.1-201ENST00000620414 2821 ntBASIC5.27□□□□□ -1.57
TRIM4Q9C037 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
TRIM4Q9C037 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM4Q9C037 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
TRIM4Q9C037 RPS6P23-201ENST00000413224 722 ntBASIC5.27□□□□□ -1.57
TRIM4Q9C037 RPSAP35-201ENST00000413753 818 ntBASIC5.27□□□□□ -1.57
TRIM4Q9C037 AC007161.1-204ENST00000423039 460 ntBASIC5.27□□□□□ -1.57
TRIM4Q9C037 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.27□□□□□ -1.57
TRIM4Q9C037 AC005033.1-201ENST00000428904 813 ntBASIC5.27□□□□□ -1.57
TRIM4Q9C037 HSPD1P12-201ENST00000429127 1069 ntBASIC5.27□□□□□ -1.57
TRIM4Q9C037 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM4Q9C037 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM4Q9C037 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.27□□□□□ -1.57
TRIM4Q9C037 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM4Q9C037 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.27□□□□□ -1.57
TRIM4Q9C037 RPS29P33-201ENST00000456717 146 ntBASIC5.27□□□□□ -1.57
TRIM4Q9C037 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM4Q9C037 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.27□□□□□ -1.57
TRIM4Q9C037 AC138938.1-201ENST00000515431 782 ntBASIC5.27□□□□□ -1.57
TRIM4Q9C037 AC092709.1-201ENST00000521355 1045 ntBASIC5.27□□□□□ -1.57
TRIM4Q9C037 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM4Q9C037 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM4Q9C037 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.27□□□□□ -1.57
TRIM4Q9C037 MIR4311-201ENST00000580794 100 ntBASIC5.27□□□□□ -1.57
TRIM4Q9C037 AC011840.5-201ENST00000582125 771 ntBASIC5.27□□□□□ -1.57
TRIM4Q9C037 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.27□□□□□ -1.57
TRIM4Q9C037 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.27□□□□□ -1.57
TRIM4Q9C037 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM4Q9C037 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.27□□□□□ -1.57
TRIM4Q9C037 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.27□□□□□ -1.57
TRIM4Q9C037 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.27□□□□□ -1.57
TRIM4Q9C037 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.27□□□□□ -1.57
TRIM4Q9C037 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
TRIM4Q9C037 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.27□□□□□ -1.57
TRIM4Q9C037 LINC01109-201ENST00000603837 3081 ntBASIC5.27□□□□□ -1.57
TRIM4Q9C037 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM4Q9C037 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM4Q9C037 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM4Q9C037 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.26□□□□□ -1.57
TRIM4Q9C037 THAP12P8-201ENST00000447914 2115 ntBASIC5.26□□□□□ -1.57
TRIM4Q9C037 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.26□□□□□ -1.57
TRIM4Q9C037 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM4Q9C037 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.26□□□□□ -1.57
TRIM4Q9C037 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
TRIM4Q9C037 AC010132.2-201ENST00000295493 1043 ntBASIC5.26□□□□□ -1.57
TRIM4Q9C037 AL109941.1-201ENST00000401925 229 ntBASIC5.26□□□□□ -1.57
TRIM4Q9C037 RN7SKP199-201ENST00000410325 305 ntBASIC5.26□□□□□ -1.57
TRIM4Q9C037 AC104333.2-201ENST00000422630 192 ntBASIC5.26□□□□□ -1.57
TRIM4Q9C037 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.26□□□□□ -1.57
TRIM4Q9C037 AL133173.1-201ENST00000423458 397 ntBASIC5.26□□□□□ -1.57
TRIM4Q9C037 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.26□□□□□ -1.57
TRIM4Q9C037 TMEM183AP1-205ENST00000432739 290 ntBASIC5.26□□□□□ -1.57
TRIM4Q9C037 OR52B5P-201ENST00000435337 951 ntBASIC5.26□□□□□ -1.57
TRIM4Q9C037 NDUFA5P9-201ENST00000472609 340 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms