Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
SCAPERQ9BY12 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SCAPERQ9BY12 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SCAPERQ9BY12 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SCAPERQ9BY12 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SCAPERQ9BY12 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SCAPERQ9BY12 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SCAPERQ9BY12 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC7.48□□□□□ -1.21
SCAPERQ9BY12 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC7.48□□□□□ -1.21
SCAPERQ9BY12 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC7.48□□□□□ -1.21
SCAPERQ9BY12 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SCAPERQ9BY12 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SCAPERQ9BY12 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
SCAPERQ9BY12 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
SCAPERQ9BY12 AC114755.2-201ENST00000413520 361 ntBASIC7.48□□□□□ -1.21
SCAPERQ9BY12 AC016831.4-201ENST00000438302 307 ntBASIC7.48□□□□□ -1.21
SCAPERQ9BY12 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC7.48□□□□□ -1.21
SCAPERQ9BY12 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC7.48□□□□□ -1.21
SCAPERQ9BY12 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC7.48□□□□□ -1.21
SCAPERQ9BY12 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC7.48□□□□□ -1.21
SCAPERQ9BY12 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC7.48□□□□□ -1.21
SCAPERQ9BY12 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC7.48□□□□□ -1.21
SCAPERQ9BY12 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC7.48□□□□□ -1.21
SCAPERQ9BY12 AC023575.1-201ENST00000580510 358 ntBASIC7.48□□□□□ -1.21
SCAPERQ9BY12 AC069366.1-201ENST00000583159 838 ntBASIC7.48□□□□□ -1.21
SCAPERQ9BY12 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC7.48□□□□□ -1.21
SCAPERQ9BY12 UBA2-208ENST00000592791 910 ntTSL 2 BASIC7.48□□□□□ -1.21
SCAPERQ9BY12 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC7.48□□□□□ -1.21
SCAPERQ9BY12 AC087821.1-201ENST00000623639 567 ntBASIC7.48□□□□□ -1.21
SCAPERQ9BY12 AC100871.1-201ENST00000507871 1456 ntBASIC7.48□□□□□ -1.21
SCAPERQ9BY12 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC7.48□□□□□ -1.21
SCAPERQ9BY12 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC7.48□□□□□ -1.21
SCAPERQ9BY12 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SCAPERQ9BY12 AP000432.2-201ENST00000624164 2048 ntBASIC7.48□□□□□ -1.21
SCAPERQ9BY12 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SCAPERQ9BY12 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC7.47□□□□□ -1.21
SCAPERQ9BY12 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SCAPERQ9BY12 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC7.47□□□□□ -1.21
SCAPERQ9BY12 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC7.47□□□□□ -1.21
SCAPERQ9BY12 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SCAPERQ9BY12 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
SCAPERQ9BY12 RNA5SP397-201ENST00000391323 118 ntBASIC7.47□□□□□ -1.21
SCAPERQ9BY12 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC7.47□□□□□ -1.21
SCAPERQ9BY12 AC090018.1-201ENST00000434369 367 ntBASIC7.47□□□□□ -1.21
SCAPERQ9BY12 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SCAPERQ9BY12 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC7.47□□□□□ -1.21
SCAPERQ9BY12 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SCAPERQ9BY12 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC7.47□□□□□ -1.21
SCAPERQ9BY12 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC7.47□□□□□ -1.21
SCAPERQ9BY12 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC7.47□□□□□ -1.21
SCAPERQ9BY12 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
SCAPERQ9BY12 AC005191.1-201ENST00000603950 358 ntBASIC7.47□□□□□ -1.21
SCAPERQ9BY12 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC7.47□□□□□ -1.21
SCAPERQ9BY12 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
SCAPERQ9BY12 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
SCAPERQ9BY12 ECM1P2-201ENST00000503354 1577 ntBASIC7.47□□□□□ -1.21
SCAPERQ9BY12 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
SCAPERQ9BY12 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC7.47□□□□□ -1.21
SCAPERQ9BY12 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC7.47□□□□□ -1.21
SCAPERQ9BY12 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SCAPERQ9BY12 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
SCAPERQ9BY12 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC7.46□□□□□ -1.21
SCAPERQ9BY12 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC7.46□□□□□ -1.21
SCAPERQ9BY12 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.21
SCAPERQ9BY12 BX276092.6-201ENST00000430476 250 ntBASIC7.46□□□□□ -1.21
SCAPERQ9BY12 RPL12P28-201ENST00000430852 489 ntBASIC7.46□□□□□ -1.21
SCAPERQ9BY12 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
SCAPERQ9BY12 AC000111.2-201ENST00000448200 210 ntBASIC7.46□□□□□ -1.21
SCAPERQ9BY12 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC7.46□□□□□ -1.21
SCAPERQ9BY12 BX276092.8-201ENST00000455722 250 ntBASIC7.46□□□□□ -1.21
SCAPERQ9BY12 RPS5P7-201ENST00000456664 608 ntBASIC7.46□□□□□ -1.21
SCAPERQ9BY12 AC010618.1-201ENST00000469924 477 ntBASIC7.46□□□□□ -1.21
SCAPERQ9BY12 AC109327.1-201ENST00000471666 403 ntBASIC7.46□□□□□ -1.21
SCAPERQ9BY12 AC130364.2-201ENST00000528639 604 ntBASIC7.46□□□□□ -1.21
SCAPERQ9BY12 AC067959.1-201ENST00000604334 379 ntBASIC7.46□□□□□ -1.21
SCAPERQ9BY12 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC7.46□□□□□ -1.21
SCAPERQ9BY12 AC007497.1-201ENST00000610421 561 ntBASIC7.46□□□□□ -1.21
SCAPERQ9BY12 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC7.46□□□□□ -1.21
SCAPERQ9BY12 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC7.46□□□□□ -1.21
SCAPERQ9BY12 AC138907.8-201ENST00000623981 2256 ntBASIC7.46□□□□□ -1.21
SCAPERQ9BY12 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
SCAPERQ9BY12 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC7.46□□□□□ -1.22
SCAPERQ9BY12 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC7.46□□□□□ -1.22
SCAPERQ9BY12 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
SCAPERQ9BY12 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
SCAPERQ9BY12 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC7.45□□□□□ -1.22
SCAPERQ9BY12 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
SCAPERQ9BY12 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SCAPERQ9BY12 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
SCAPERQ9BY12 MAST4-207ENST00000407621 559 ntTSL 2 BASIC7.45□□□□□ -1.22
SCAPERQ9BY12 AL158827.1-201ENST00000416300 391 ntBASIC7.45□□□□□ -1.22
SCAPERQ9BY12 AC009238.2-201ENST00000431026 355 ntBASIC7.45□□□□□ -1.22
SCAPERQ9BY12 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
SCAPERQ9BY12 MED28P3-201ENST00000444288 531 ntBASIC7.45□□□□□ -1.22
SCAPERQ9BY12 TAAR4P-201ENST00000454843 1039 ntBASIC7.45□□□□□ -1.22
SCAPERQ9BY12 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC7.45□□□□□ -1.22
SCAPERQ9BY12 AC138701.1-201ENST00000524329 714 ntBASIC7.45□□□□□ -1.22
SCAPERQ9BY12 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC7.45□□□□□ -1.22
SCAPERQ9BY12 AC105129.1-201ENST00000560250 297 ntBASIC7.45□□□□□ -1.22
SCAPERQ9BY12 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC7.45□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms