Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
TRAIPQ9BWF2 RPL12P13-201ENST00000310055 497 ntBASIC7.4□□□□□ -1.22
TRAIPQ9BWF2 RNA5SP321-201ENST00000362722 111 ntBASIC7.4□□□□□ -1.22
TRAIPQ9BWF2 RN7SKP250-201ENST00000363924 321 ntBASIC7.4□□□□□ -1.22
TRAIPQ9BWF2 SNORA70.3-201ENST00000365075 132 ntBASIC7.4□□□□□ -1.22
TRAIPQ9BWF2 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC7.4□□□□□ -1.22
TRAIPQ9BWF2 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC7.4□□□□□ -1.22
TRAIPQ9BWF2 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC7.4□□□□□ -1.22
TRAIPQ9BWF2 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC7.4□□□□□ -1.22
TRAIPQ9BWF2 RPL24P2-201ENST00000421023 475 ntBASIC7.4□□□□□ -1.22
TRAIPQ9BWF2 RPL7AP51-201ENST00000422016 760 ntBASIC7.4□□□□□ -1.22
TRAIPQ9BWF2 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC7.4□□□□□ -1.22
TRAIPQ9BWF2 NIPA2P1-201ENST00000426223 976 ntBASIC7.4□□□□□ -1.22
TRAIPQ9BWF2 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
TRAIPQ9BWF2 VDAC1P6-201ENST00000430062 855 ntBASIC7.4□□□□□ -1.22
TRAIPQ9BWF2 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC7.4□□□□□ -1.22
TRAIPQ9BWF2 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC7.4□□□□□ -1.22
TRAIPQ9BWF2 KCTD10P1-201ENST00000434203 625 ntBASIC7.4□□□□□ -1.22
TRAIPQ9BWF2 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
TRAIPQ9BWF2 COX6CP2-201ENST00000444980 225 ntBASIC7.4□□□□□ -1.22
TRAIPQ9BWF2 LAPTM4BP1-201ENST00000447781 690 ntBASIC7.4□□□□□ -1.22
TRAIPQ9BWF2 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC7.4□□□□□ -1.22
TRAIPQ9BWF2 AL645937.3-201ENST00000453647 936 ntBASIC7.4□□□□□ -1.22
TRAIPQ9BWF2 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC7.4□□□□□ -1.22
TRAIPQ9BWF2 RPL18AP17-201ENST00000455326 198 ntBASIC7.4□□□□□ -1.22
TRAIPQ9BWF2 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC7.4□□□□□ -1.22
TRAIPQ9BWF2 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
TRAIPQ9BWF2 PPIAP21-201ENST00000464473 501 ntBASIC7.4□□□□□ -1.22
TRAIPQ9BWF2 SETP11-201ENST00000473027 690 ntBASIC7.4□□□□□ -1.22
TRAIPQ9BWF2 OR9A1P-202ENST00000484361 945 ntBASIC7.4□□□□□ -1.22
TRAIPQ9BWF2 AC108078.3-201ENST00000502633 489 ntBASIC7.4□□□□□ -1.22
TRAIPQ9BWF2 LTV1P1-201ENST00000510683 1237 ntBASIC7.4□□□□□ -1.22
TRAIPQ9BWF2 RN7SKP183-201ENST00000517169 324 ntBASIC7.4□□□□□ -1.22
TRAIPQ9BWF2 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC7.4□□□□□ -1.22
TRAIPQ9BWF2 MTCYBP20-201ENST00000524239 1129 ntBASIC7.4□□□□□ -1.22
TRAIPQ9BWF2 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
TRAIPQ9BWF2 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC7.4□□□□□ -1.22
TRAIPQ9BWF2 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC7.4□□□□□ -1.22
TRAIPQ9BWF2 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
TRAIPQ9BWF2 AC005951.1-201ENST00000576706 485 ntBASIC7.4□□□□□ -1.22
TRAIPQ9BWF2 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC7.4□□□□□ -1.22
TRAIPQ9BWF2 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC7.4□□□□□ -1.22
TRAIPQ9BWF2 AL078623.1-201ENST00000602702 907 ntBASIC7.4□□□□□ -1.22
TRAIPQ9BWF2 AC069304.2-201ENST00000605154 435 ntBASIC7.4□□□□□ -1.22
TRAIPQ9BWF2 AC128687.1-201ENST00000605304 619 ntBASIC7.4□□□□□ -1.22
TRAIPQ9BWF2 AC092354.1-201ENST00000606057 376 ntBASIC7.4□□□□□ -1.22
TRAIPQ9BWF2 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC7.4□□□□□ -1.22
TRAIPQ9BWF2 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC7.4□□□□□ -1.22
TRAIPQ9BWF2 AC068726.1-201ENST00000610993 341 ntBASIC7.4□□□□□ -1.22
TRAIPQ9BWF2 AC034229.6-201ENST00000623704 224 ntBASIC7.4□□□□□ -1.22
TRAIPQ9BWF2 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
TRAIPQ9BWF2 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC7.4□□□□□ -1.22
TRAIPQ9BWF2 AC104837.1-201ENST00000444644 1587 ntBASIC7.4□□□□□ -1.22
TRAIPQ9BWF2 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
TRAIPQ9BWF2 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC7.4□□□□□ -1.22
TRAIPQ9BWF2 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC7.4□□□□□ -1.23
TRAIPQ9BWF2 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC7.4□□□□□ -1.23
TRAIPQ9BWF2 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
TRAIPQ9BWF2 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC7.4□□□□□ -1.23
TRAIPQ9BWF2 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC7.4□□□□□ -1.23
TRAIPQ9BWF2 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC7.4□□□□□ -1.23
TRAIPQ9BWF2 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC7.4□□□□□ -1.23
TRAIPQ9BWF2 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
TRAIPQ9BWF2 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
TRAIPQ9BWF2 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
TRAIPQ9BWF2 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC7.4□□□□□ -1.23
TRAIPQ9BWF2 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 AL034370.1-201ENST00000397254 1590 ntBASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 MTCO1P14-201ENST00000441695 1559 ntBASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 DDX43P2-201ENST00000604753 1354 ntBASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 RPL21P132-201ENST00000331267 462 ntBASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 RNA5SP140-201ENST00000364524 92 ntBASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 Y_RNA.302-201ENST00000364997 102 ntBASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 CUBN-201ENST00000377823 705 ntTSL 3 BASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 RNU6-603P-201ENST00000411403 107 ntBASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 AC002524.1-201ENST00000411687 547 ntBASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 TPMTP3-201ENST00000411928 735 ntBASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 MTND4P6-201ENST00000438297 472 ntBASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 FABP5P2-201ENST00000439042 408 ntBASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 COL11A2P1-205ENST00000441798 676 ntBASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 SNRPBP1-201ENST00000443634 282 ntBASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms