Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDLIM5Q96HC4 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDLIM5Q96HC4 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDLIM5Q96HC4 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDLIM5Q96HC4 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
PDLIM5Q96HC4 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDLIM5Q96HC4 RNA5SP183-201ENST00000362452 119 ntBASIC5.16□□□□□ -1.58
PDLIM5Q96HC4 AC007618.1-201ENST00000366455 732 ntBASIC5.16□□□□□ -1.58
PDLIM5Q96HC4 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PDLIM5Q96HC4 OR8V1P-201ENST00000395193 873 ntBASIC5.16□□□□□ -1.58
PDLIM5Q96HC4 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.16□□□□□ -1.58
PDLIM5Q96HC4 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.16□□□□□ -1.58
PDLIM5Q96HC4 TCEA1P3-201ENST00000443005 880 ntBASIC5.16□□□□□ -1.58
PDLIM5Q96HC4 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.16□□□□□ -1.58
PDLIM5Q96HC4 AC104634.1-201ENST00000452720 462 ntBASIC5.16□□□□□ -1.58
PDLIM5Q96HC4 AC021660.1-201ENST00000465006 554 ntBASIC5.16□□□□□ -1.58
PDLIM5Q96HC4 RN7SL189P-201ENST00000468631 289 ntBASIC5.16□□□□□ -1.58
PDLIM5Q96HC4 RN7SL717P-201ENST00000478343 297 ntBASIC5.16□□□□□ -1.58
PDLIM5Q96HC4 AC020779.1-201ENST00000478757 796 ntBASIC5.16□□□□□ -1.58
PDLIM5Q96HC4 RN7SL547P-201ENST00000490793 290 ntBASIC5.16□□□□□ -1.58
PDLIM5Q96HC4 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.16□□□□□ -1.58
PDLIM5Q96HC4 RNU6-362P-201ENST00000516736 90 ntBASIC5.16□□□□□ -1.58
PDLIM5Q96HC4 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.16□□□□□ -1.58
PDLIM5Q96HC4 AC100784.1-201ENST00000522790 310 ntBASIC5.16□□□□□ -1.58
PDLIM5Q96HC4 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.16□□□□□ -1.58
PDLIM5Q96HC4 C1GALT1P1-201ENST00000548895 1089 ntBASIC5.16□□□□□ -1.58
PDLIM5Q96HC4 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
PDLIM5Q96HC4 AL359513.1-201ENST00000614364 557 ntBASIC5.16□□□□□ -1.58
PDLIM5Q96HC4 AC007204.2-201ENST00000615022 616 ntBASIC5.16□□□□□ -1.58
PDLIM5Q96HC4 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.16□□□□□ -1.58
PDLIM5Q96HC4 AC020763.5-201ENST00000623298 430 ntBASIC5.16□□□□□ -1.58
PDLIM5Q96HC4 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
PDLIM5Q96HC4 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
PDLIM5Q96HC4 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.16□□□□□ -1.58
PDLIM5Q96HC4 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.16□□□□□ -1.58
PDLIM5Q96HC4 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.16□□□□□ -1.58
PDLIM5Q96HC4 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
PDLIM5Q96HC4 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.16□□□□□ -1.58
PDLIM5Q96HC4 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDLIM5Q96HC4 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDLIM5Q96HC4 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDLIM5Q96HC4 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.15□□□□□ -1.58
PDLIM5Q96HC4 OR51C1P-202ENST00000641159 1444 ntBASIC5.15□□□□□ -1.58
PDLIM5Q96HC4 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.15□□□□□ -1.58
PDLIM5Q96HC4 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
PDLIM5Q96HC4 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.58
PDLIM5Q96HC4 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
PDLIM5Q96HC4 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
PDLIM5Q96HC4 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
PDLIM5Q96HC4 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
PDLIM5Q96HC4 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.15□□□□□ -1.58
PDLIM5Q96HC4 OR9K1P-201ENST00000326513 941 ntBASIC5.15□□□□□ -1.59
PDLIM5Q96HC4 RNA5SP132-201ENST00000364725 118 ntBASIC5.15□□□□□ -1.59
PDLIM5Q96HC4 AC009804.1-201ENST00000400949 179 ntBASIC5.15□□□□□ -1.59
PDLIM5Q96HC4 NUDT19P3-201ENST00000404698 555 ntBASIC5.15□□□□□ -1.59
PDLIM5Q96HC4 RNU2-50P-201ENST00000410494 143 ntBASIC5.15□□□□□ -1.59
PDLIM5Q96HC4 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.15□□□□□ -1.59
PDLIM5Q96HC4 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.15□□□□□ -1.59
PDLIM5Q96HC4 AL133325.1-201ENST00000421090 382 ntBASIC5.15□□□□□ -1.59
PDLIM5Q96HC4 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.15□□□□□ -1.59
PDLIM5Q96HC4 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.15□□□□□ -1.59
PDLIM5Q96HC4 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.15□□□□□ -1.59
PDLIM5Q96HC4 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
PDLIM5Q96HC4 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.15□□□□□ -1.59
PDLIM5Q96HC4 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.15□□□□□ -1.59
PDLIM5Q96HC4 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.15□□□□□ -1.59
PDLIM5Q96HC4 AL157827.1-201ENST00000447622 132 ntBASIC5.15□□□□□ -1.59
PDLIM5Q96HC4 RPL12P24-201ENST00000474907 486 ntBASIC5.15□□□□□ -1.59
PDLIM5Q96HC4 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.15□□□□□ -1.59
PDLIM5Q96HC4 RPEP1-201ENST00000504507 658 ntBASIC5.15□□□□□ -1.59
PDLIM5Q96HC4 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.15□□□□□ -1.59
PDLIM5Q96HC4 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.15□□□□□ -1.59
PDLIM5Q96HC4 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.15□□□□□ -1.59
PDLIM5Q96HC4 RNU6-760P-201ENST00000516078 97 ntBASIC5.15□□□□□ -1.59
PDLIM5Q96HC4 EIF4A2P3-201ENST00000525903 1055 ntBASIC5.15□□□□□ -1.59
PDLIM5Q96HC4 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.15□□□□□ -1.59
PDLIM5Q96HC4 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.15□□□□□ -1.59
PDLIM5Q96HC4 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.15□□□□□ -1.59
PDLIM5Q96HC4 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.15□□□□□ -1.59
PDLIM5Q96HC4 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.15□□□□□ -1.59
PDLIM5Q96HC4 RPL10P14-201ENST00000565265 298 ntBASIC5.15□□□□□ -1.59
PDLIM5Q96HC4 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PDLIM5Q96HC4 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PDLIM5Q96HC4 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PDLIM5Q96HC4 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.15□□□□□ -1.59
PDLIM5Q96HC4 AP005131.7-201ENST00000610087 611 ntBASIC5.15□□□□□ -1.59
PDLIM5Q96HC4 AC118658.2-201ENST00000618697 459 ntBASIC5.15□□□□□ -1.59
PDLIM5Q96HC4 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC5.15□□□□□ -1.59
PDLIM5Q96HC4 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.15□□□□□ -1.59
PDLIM5Q96HC4 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC5.15□□□□□ -1.59
PDLIM5Q96HC4 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.15□□□□□ -1.59
PDLIM5Q96HC4 HSPA8P14-201ENST00000552265 1805 ntBASIC5.15□□□□□ -1.59
PDLIM5Q96HC4 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
PDLIM5Q96HC4 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.15□□□□□ -1.59
PDLIM5Q96HC4 SOCS5P3-201ENST00000425115 1576 ntBASIC5.15□□□□□ -1.59
PDLIM5Q96HC4 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PDLIM5Q96HC4 AC092747.4-201ENST00000620519 1861 ntBASIC5.15□□□□□ -1.59
PDLIM5Q96HC4 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.15□□□□□ -1.59
PDLIM5Q96HC4 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.15□□□□□ -1.59
PDLIM5Q96HC4 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms