Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AC079600.1-201ENST00000550326 297 ntBASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 AC092868.3-201ENST00000560515 784 ntBASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 AC005252.1-201ENST00000604518 1063 ntBASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 AL355802.4-201ENST00000607635 548 ntBASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 AP000240.1-201ENST00000609910 452 ntBASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 AL139407.1-201ENST00000613826 1175 ntBASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 AC008115.3-201ENST00000614874 549 ntBASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 AC132068.1-201ENST00000623805 459 ntBASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 AC007683.2-201ENST00000624681 714 ntBASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 AC106858.1-201ENST00000637497 429 ntBASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 MIR4302-201ENST00000638058 60 ntBASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 AC112198.2-201ENST00000426589 6996 ntBASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 RNU6-249P-201ENST00000363016 102 ntBASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 RNU6-40P-201ENST00000384254 107 ntBASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 BMS1P17-202ENST00000416720 316 ntBASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 CHEK2P5-201ENST00000423877 246 ntBASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 UBE2V1P6-201ENST00000430840 422 ntBASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 CLUHP1-201ENST00000435012 1190 ntBASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 EEF1B2P6-201ENST00000445713 673 ntBASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 AP002345.1-201ENST00000456493 928 ntBASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 RN7SL189P-201ENST00000468631 289 ntBASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 RN7SL174P-201ENST00000475578 289 ntBASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 AC015908.1-201ENST00000478739 476 ntBASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 AC104629.1-201ENST00000494226 508 ntBASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 AC006427.1-201ENST00000514359 712 ntBASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 RNU6-513P-201ENST00000516104 104 ntBASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 CYCSP22-201ENST00000517555 339 ntBASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 AC112191.2-201ENST00000522428 333 ntBASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 CKS1BP1-201ENST00000555221 240 ntBASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 AL049872.1-201ENST00000556323 322 ntBASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 AC011445.2-201ENST00000599274 173 ntBASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 AC008814.1-201ENST00000603797 406 ntBASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 AC018695.5-201ENST00000605872 315 ntBASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 AC015922.4-201ENST00000612568 690 ntBASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 AC108359.1-201ENST00000616451 1211 ntBASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 AC126175.1-201ENST00000617041 758 ntBASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 AC005005.4-201ENST00000623789 16698 ntBASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 AC025574.1-201ENST00000554784 1653 ntBASIC5.28□□□□□ -1.56
SLC44A1Q8WWI5 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SLC44A1Q8WWI5 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms