Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC6.03□□□□□ -1.44
SNED1Q8TER0 ECM1P2-201ENST00000503354 1577 ntBASIC6.03□□□□□ -1.44
SNED1Q8TER0 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SNED1Q8TER0 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SNED1Q8TER0 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
SNED1Q8TER0 AL591135.1-201ENST00000401578 5914 ntBASIC6.02□□□□□ -1.45
SNED1Q8TER0 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SNED1Q8TER0 MAST4-207ENST00000407621 559 ntTSL 2 BASIC6.02□□□□□ -1.45
SNED1Q8TER0 AC114755.2-201ENST00000413520 361 ntBASIC6.02□□□□□ -1.45
SNED1Q8TER0 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC6.02□□□□□ -1.45
SNED1Q8TER0 USP9YP2-201ENST00000504503 1000 ntBASIC6.02□□□□□ -1.45
SNED1Q8TER0 AC021193.1-201ENST00000511607 420 ntBASIC6.02□□□□□ -1.45
SNED1Q8TER0 USP9YP1-201ENST00000513521 1002 ntBASIC6.02□□□□□ -1.45
SNED1Q8TER0 RNU2-30P-201ENST00000516209 141 ntBASIC6.02□□□□□ -1.45
SNED1Q8TER0 AC092709.1-201ENST00000521355 1045 ntBASIC6.02□□□□□ -1.45
SNED1Q8TER0 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC6.02□□□□□ -1.45
SNED1Q8TER0 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC6.02□□□□□ -1.45
SNED1Q8TER0 TVP23CP2-201ENST00000571473 623 ntBASIC6.02□□□□□ -1.45
SNED1Q8TER0 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SNED1Q8TER0 AC108359.1-201ENST00000616451 1211 ntBASIC6.02□□□□□ -1.45
SNED1Q8TER0 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SNED1Q8TER0 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC6.02□□□□□ -1.45
SNED1Q8TER0 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SNED1Q8TER0 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC6.02□□□□□ -1.45
SNED1Q8TER0 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SNED1Q8TER0 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
SNED1Q8TER0 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC6.02□□□□□ -1.45
SNED1Q8TER0 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SNED1Q8TER0 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SNED1Q8TER0 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.02□□□□□ -1.45
SNED1Q8TER0 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SNED1Q8TER0 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SNED1Q8TER0 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
SNED1Q8TER0 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SNED1Q8TER0 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SNED1Q8TER0 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC6.01□□□□□ -1.45
SNED1Q8TER0 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
SNED1Q8TER0 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC6.01□□□□□ -1.45
SNED1Q8TER0 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC6.01□□□□□ -1.45
SNED1Q8TER0 BX842559.2-201ENST00000451418 605 ntBASIC6.01□□□□□ -1.45
SNED1Q8TER0 PPIAP21-201ENST00000464473 501 ntBASIC6.01□□□□□ -1.45
SNED1Q8TER0 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC6.01□□□□□ -1.45
SNED1Q8TER0 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC6.01□□□□□ -1.45
SNED1Q8TER0 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC6.01□□□□□ -1.45
SNED1Q8TER0 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC6.01□□□□□ -1.45
SNED1Q8TER0 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC6.01□□□□□ -1.45
SNED1Q8TER0 MTCYBP13-201ENST00000578634 1093 ntBASIC6.01□□□□□ -1.45
SNED1Q8TER0 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC6.01□□□□□ -1.45
SNED1Q8TER0 AC007497.1-201ENST00000610421 561 ntBASIC6.01□□□□□ -1.45
SNED1Q8TER0 AL022401.1-201ENST00000619498 108 ntBASIC6.01□□□□□ -1.45
SNED1Q8TER0 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC6.01□□□□□ -1.45
SNED1Q8TER0 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
SNED1Q8TER0 FTO-223ENST00000640179 210 ntTSL 5 BASIC6.01□□□□□ -1.45
SNED1Q8TER0 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC6.01□□□□□ -1.45
SNED1Q8TER0 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SNED1Q8TER0 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.01□□□□□ -1.45
SNED1Q8TER0 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
SNED1Q8TER0 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
SNED1Q8TER0 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
SNED1Q8TER0 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.01□□□□□ -1.45
SNED1Q8TER0 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.01□□□□□ -1.45
SNED1Q8TER0 AC020656.2-201ENST00000613291 5309 ntBASIC6.01□□□□□ -1.45
SNED1Q8TER0 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
SNED1Q8TER0 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SNED1Q8TER0 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.01□□□□□ -1.45
SNED1Q8TER0 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SNED1Q8TER0 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SNED1Q8TER0 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.01□□□□□ -1.45
SNED1Q8TER0 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SNED1Q8TER0 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SNED1Q8TER0 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC6.01□□□□□ -1.45
SNED1Q8TER0 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SNED1Q8TER0 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC6.01□□□□□ -1.45
SNED1Q8TER0 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
SNED1Q8TER0 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
SNED1Q8TER0 SNORA48.4-201ENST00000391089 134 ntBASIC6□□□□□ -1.45
SNED1Q8TER0 RNA5SP241-201ENST00000391326 114 ntBASIC6□□□□□ -1.45
SNED1Q8TER0 MIR1193-201ENST00000408109 78 ntBASIC6□□□□□ -1.45
SNED1Q8TER0 GPS2P1-201ENST00000411761 986 ntBASIC6□□□□□ -1.45
SNED1Q8TER0 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC6□□□□□ -1.45
SNED1Q8TER0 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC6□□□□□ -1.45
SNED1Q8TER0 AC046176.1-201ENST00000435260 1170 ntBASIC6□□□□□ -1.45
SNED1Q8TER0 AL450023.3-201ENST00000440592 271 ntBASIC6□□□□□ -1.45
SNED1Q8TER0 TXNP2-201ENST00000443918 295 ntBASIC6□□□□□ -1.45
SNED1Q8TER0 MTND4LP12-201ENST00000448237 295 ntBASIC6□□□□□ -1.45
SNED1Q8TER0 RPS5P7-201ENST00000456664 608 ntBASIC6□□□□□ -1.45
SNED1Q8TER0 SSR3-206ENST00000476217 807 ntTSL 3 BASIC6□□□□□ -1.45
SNED1Q8TER0 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC6□□□□□ -1.45
SNED1Q8TER0 AC027369.5-201ENST00000533838 755 ntBASIC6□□□□□ -1.45
SNED1Q8TER0 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC6□□□□□ -1.45
SNED1Q8TER0 RN7SL802P-201ENST00000577858 299 ntBASIC6□□□□□ -1.45
SNED1Q8TER0 KPNA2P3-201ENST00000584190 848 ntBASIC6□□□□□ -1.45
SNED1Q8TER0 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6□□□□□ -1.45
SNED1Q8TER0 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC6□□□□□ -1.45
SNED1Q8TER0 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
SNED1Q8TER0 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SNED1Q8TER0 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6□□□□□ -1.45
SNED1Q8TER0 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6□□□□□ -1.45
SNED1Q8TER0 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
SNED1Q8TER0 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms