Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.3□□□□□ -1.56
ZNF549Q6P9A3 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.3□□□□□ -1.56
ZNF549Q6P9A3 Y_RNA.62-201ENST00000362840 99 ntBASIC5.3□□□□□ -1.56
ZNF549Q6P9A3 RN7SKP124-201ENST00000364730 341 ntBASIC5.3□□□□□ -1.56
ZNF549Q6P9A3 OR1L6-202ENST00000373684 1044 ntBASIC5.3□□□□□ -1.56
ZNF549Q6P9A3 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.3□□□□□ -1.56
ZNF549Q6P9A3 AC124944.2-201ENST00000429866 1242 ntBASIC5.3□□□□□ -1.56
ZNF549Q6P9A3 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
ZNF549Q6P9A3 AC013410.1-201ENST00000436223 1232 ntBASIC5.3□□□□□ -1.56
ZNF549Q6P9A3 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.3□□□□□ -1.56
ZNF549Q6P9A3 SUMO2P1-206ENST00000445436 284 ntBASIC5.3□□□□□ -1.56
ZNF549Q6P9A3 NOP56P2-201ENST00000447491 769 ntBASIC5.3□□□□□ -1.56
ZNF549Q6P9A3 C1DP3-201ENST00000455013 423 ntBASIC5.3□□□□□ -1.56
ZNF549Q6P9A3 AP000797.2-201ENST00000475768 606 ntBASIC5.3□□□□□ -1.56
ZNF549Q6P9A3 RPS12P31-201ENST00000491419 398 ntBASIC5.3□□□□□ -1.56
ZNF549Q6P9A3 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.3□□□□□ -1.56
ZNF549Q6P9A3 MTCYBP35-201ENST00000503630 1137 ntBASIC5.3□□□□□ -1.56
ZNF549Q6P9A3 RNU6-334P-201ENST00000517072 102 ntBASIC5.3□□□□□ -1.56
ZNF549Q6P9A3 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.3□□□□□ -1.56
ZNF549Q6P9A3 AC104115.2-201ENST00000523026 687 ntBASIC5.3□□□□□ -1.56
ZNF549Q6P9A3 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC5.3□□□□□ -1.56
ZNF549Q6P9A3 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.3□□□□□ -1.56
ZNF549Q6P9A3 C1DP5-201ENST00000525775 383 ntBASIC5.3□□□□□ -1.56
ZNF549Q6P9A3 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.3□□□□□ -1.56
ZNF549Q6P9A3 AC090286.3-201ENST00000573133 187 ntBASIC5.3□□□□□ -1.56
ZNF549Q6P9A3 RBM22P1-201ENST00000578589 1214 ntBASIC5.3□□□□□ -1.56
ZNF549Q6P9A3 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.3□□□□□ -1.56
ZNF549Q6P9A3 BNIP3P24-201ENST00000593398 557 ntBASIC5.3□□□□□ -1.56
ZNF549Q6P9A3 AC009027.1-201ENST00000604510 479 ntBASIC5.3□□□□□ -1.56
ZNF549Q6P9A3 AC084036.1-201ENST00000609190 508 ntBASIC5.3□□□□□ -1.56
ZNF549Q6P9A3 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.3□□□□□ -1.56
ZNF549Q6P9A3 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.3□□□□□ -1.56
ZNF549Q6P9A3 AC126175.1-201ENST00000617041 758 ntBASIC5.3□□□□□ -1.56
ZNF549Q6P9A3 AC074276.2-201ENST00000619891 348 ntBASIC5.3□□□□□ -1.56
ZNF549Q6P9A3 AC084824.4-201ENST00000620106 731 ntBASIC5.3□□□□□ -1.56
ZNF549Q6P9A3 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.3□□□□□ -1.56
ZNF549Q6P9A3 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
ZNF549Q6P9A3 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.3□□□□□ -1.56
ZNF549Q6P9A3 AC004158.1-201ENST00000564508 4319 ntBASIC5.3□□□□□ -1.56
ZNF549Q6P9A3 AC079298.1-201ENST00000625026 1619 ntBASIC5.3□□□□□ -1.56
ZNF549Q6P9A3 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
ZNF549Q6P9A3 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 RNU6-792P-201ENST00000363490 107 ntBASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 RNA5SP335-201ENST00000363817 110 ntBASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 RNU6-316P-201ENST00000391027 107 ntBASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 AMZ2P2-201ENST00000406819 1057 ntBASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 AC104843.2-201ENST00000427666 297 ntBASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 AL009048.1-201ENST00000450437 298 ntBASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 snoU109.3-201ENST00000459477 145 ntBASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 CBX1P5-201ENST00000475330 559 ntBASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 AC104982.1-201ENST00000478775 574 ntBASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 METTL15P1-201ENST00000481421 1045 ntBASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 AC010627.1-201ENST00000503819 1294 ntBASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 UGT2A3P7-201ENST00000510485 734 ntBASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 AC016559.2-201ENST00000510759 359 ntBASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 MTATP6P1-201ENST00000514057 681 ntBASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 TMEM97P2-201ENST00000517841 403 ntBASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 MORF4L1P3-201ENST00000525966 950 ntBASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 OR8K4P-201ENST00000534608 872 ntBASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 AC013444.2-201ENST00000603317 787 ntBASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 AC069431.2-201ENST00000604149 1099 ntBASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 AC106052.1-201ENST00000608029 497 ntBASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 AP000864.1-201ENST00000609424 650 ntBASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 AC109583.2-201ENST00000617367 129 ntBASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 AL445528.2-201ENST00000620582 470 ntBASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.29□□□□□ -1.56
ZNF549Q6P9A3 AC007275.1-201ENST00000621243 671 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms