Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
HIST2H2AA3Q6FI13 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.99□□□□□ -1.61
HIST2H2AA3Q6FI13 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
HIST2H2AA3Q6FI13 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.99□□□□□ -1.61
HIST2H2AA3Q6FI13 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.99□□□□□ -1.61
HIST2H2AA3Q6FI13 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.99□□□□□ -1.61
HIST2H2AA3Q6FI13 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HIST2H2AA3Q6FI13 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HIST2H2AA3Q6FI13 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.99□□□□□ -1.61
HIST2H2AA3Q6FI13 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.99□□□□□ -1.61
HIST2H2AA3Q6FI13 U3.25-201ENST00000391209 220 ntBASIC4.99□□□□□ -1.61
HIST2H2AA3Q6FI13 AL139039.2-201ENST00000407436 479 ntBASIC4.99□□□□□ -1.61
HIST2H2AA3Q6FI13 RN7SKP206-201ENST00000410823 293 ntBASIC4.99□□□□□ -1.61
HIST2H2AA3Q6FI13 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.99□□□□□ -1.61
HIST2H2AA3Q6FI13 CHEK2P5-201ENST00000423877 246 ntBASIC4.99□□□□□ -1.61
HIST2H2AA3Q6FI13 AC108075.1-201ENST00000424692 529 ntBASIC4.99□□□□□ -1.61
HIST2H2AA3Q6FI13 NPM1P26-201ENST00000426339 738 ntBASIC4.99□□□□□ -1.61
HIST2H2AA3Q6FI13 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HIST2H2AA3Q6FI13 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.99□□□□□ -1.61
HIST2H2AA3Q6FI13 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.99□□□□□ -1.61
HIST2H2AA3Q6FI13 AL606490.1-201ENST00000452266 765 ntBASIC4.99□□□□□ -1.61
HIST2H2AA3Q6FI13 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HIST2H2AA3Q6FI13 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC4.99□□□□□ -1.61
HIST2H2AA3Q6FI13 RPS21P4-201ENST00000487122 248 ntBASIC4.99□□□□□ -1.61
HIST2H2AA3Q6FI13 SNORA70.17-201ENST00000516449 133 ntBASIC4.99□□□□□ -1.61
HIST2H2AA3Q6FI13 IGKV2-18-201ENST00000522607 343 ntBASIC4.99□□□□□ -1.61
HIST2H2AA3Q6FI13 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.99□□□□□ -1.61
HIST2H2AA3Q6FI13 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC4.99□□□□□ -1.61
HIST2H2AA3Q6FI13 AC040958.1-201ENST00000561102 201 ntBASIC4.99□□□□□ -1.61
HIST2H2AA3Q6FI13 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.99□□□□□ -1.61
HIST2H2AA3Q6FI13 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.99□□□□□ -1.61
HIST2H2AA3Q6FI13 FAM106CP-201ENST00000582212 507 ntBASIC4.99□□□□□ -1.61
HIST2H2AA3Q6FI13 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.99□□□□□ -1.61
HIST2H2AA3Q6FI13 BNIP3P35-201ENST00000604530 490 ntBASIC4.99□□□□□ -1.61
HIST2H2AA3Q6FI13 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.99□□□□□ -1.61
HIST2H2AA3Q6FI13 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.99□□□□□ -1.61
HIST2H2AA3Q6FI13 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.99□□□□□ -1.61
HIST2H2AA3Q6FI13 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC4.99□□□□□ -1.61
HIST2H2AA3Q6FI13 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.99□□□□□ -1.61
HIST2H2AA3Q6FI13 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.99□□□□□ -1.61
HIST2H2AA3Q6FI13 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HIST2H2AA3Q6FI13 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HIST2H2AA3Q6FI13 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.99□□□□□ -1.61
HIST2H2AA3Q6FI13 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
HIST2H2AA3Q6FI13 AC093849.1-201ENST00000563631 2209 ntBASIC4.99□□□□□ -1.61
HIST2H2AA3Q6FI13 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HIST2H2AA3Q6FI13 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HIST2H2AA3Q6FI13 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HIST2H2AA3Q6FI13 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
HIST2H2AA3Q6FI13 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
HIST2H2AA3Q6FI13 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HIST2H2AA3Q6FI13 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
HIST2H2AA3Q6FI13 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HIST2H2AA3Q6FI13 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HIST2H2AA3Q6FI13 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.98□□□□□ -1.61
HIST2H2AA3Q6FI13 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.98□□□□□ -1.61
HIST2H2AA3Q6FI13 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.98□□□□□ -1.61
HIST2H2AA3Q6FI13 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
HIST2H2AA3Q6FI13 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
HIST2H2AA3Q6FI13 U3.3-201ENST00000362986 216 ntBASIC4.98□□□□□ -1.61
HIST2H2AA3Q6FI13 RN7SKP162-201ENST00000363605 345 ntBASIC4.98□□□□□ -1.61
HIST2H2AA3Q6FI13 RN7SKP113-201ENST00000363891 295 ntBASIC4.98□□□□□ -1.61
HIST2H2AA3Q6FI13 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
HIST2H2AA3Q6FI13 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HIST2H2AA3Q6FI13 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HIST2H2AA3Q6FI13 NUDT19P3-201ENST00000404698 555 ntBASIC4.98□□□□□ -1.61
HIST2H2AA3Q6FI13 AL035079.1-201ENST00000405210 287 ntBASIC4.98□□□□□ -1.61
HIST2H2AA3Q6FI13 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.98□□□□□ -1.61
HIST2H2AA3Q6FI13 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4.98□□□□□ -1.61
HIST2H2AA3Q6FI13 AC013470.3-201ENST00000420252 1194 ntBASIC4.98□□□□□ -1.61
HIST2H2AA3Q6FI13 RPS4XP16-201ENST00000427198 791 ntBASIC4.98□□□□□ -1.61
HIST2H2AA3Q6FI13 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.98□□□□□ -1.61
HIST2H2AA3Q6FI13 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.98□□□□□ -1.61
HIST2H2AA3Q6FI13 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.98□□□□□ -1.61
HIST2H2AA3Q6FI13 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.98□□□□□ -1.61
HIST2H2AA3Q6FI13 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.98□□□□□ -1.61
HIST2H2AA3Q6FI13 AC108161.1-201ENST00000461060 402 ntBASIC4.98□□□□□ -1.61
HIST2H2AA3Q6FI13 RPS4XP12-201ENST00000461747 709 ntBASIC4.98□□□□□ -1.61
HIST2H2AA3Q6FI13 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
HIST2H2AA3Q6FI13 RN7SL101P-201ENST00000496350 279 ntBASIC4.98□□□□□ -1.61
HIST2H2AA3Q6FI13 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.98□□□□□ -1.61
HIST2H2AA3Q6FI13 AC097173.1-201ENST00000505862 819 ntBASIC4.98□□□□□ -1.61
HIST2H2AA3Q6FI13 ASNSP4-201ENST00000511103 447 ntBASIC4.98□□□□□ -1.61
HIST2H2AA3Q6FI13 AC117525.1-201ENST00000515228 503 ntBASIC4.98□□□□□ -1.61
HIST2H2AA3Q6FI13 RNU6-513P-201ENST00000516104 104 ntBASIC4.98□□□□□ -1.61
HIST2H2AA3Q6FI13 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.98□□□□□ -1.61
HIST2H2AA3Q6FI13 BMPR1APS2-201ENST00000527904 1012 ntBASIC4.98□□□□□ -1.61
HIST2H2AA3Q6FI13 AC024940.3-201ENST00000538551 316 ntBASIC4.98□□□□□ -1.61
HIST2H2AA3Q6FI13 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.98□□□□□ -1.61
HIST2H2AA3Q6FI13 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
HIST2H2AA3Q6FI13 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
HIST2H2AA3Q6FI13 AC004825.1-201ENST00000555068 586 ntBASIC4.98□□□□□ -1.61
HIST2H2AA3Q6FI13 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
HIST2H2AA3Q6FI13 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
HIST2H2AA3Q6FI13 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC4.98□□□□□ -1.61
HIST2H2AA3Q6FI13 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HIST2H2AA3Q6FI13 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.98□□□□□ -1.61
HIST2H2AA3Q6FI13 SNORD39.2-201ENST00000579995 76 ntBASIC4.98□□□□□ -1.61
HIST2H2AA3Q6FI13 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.98□□□□□ -1.61
HIST2H2AA3Q6FI13 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 331.9 ms