Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 CDY9P-201ENST00000451397 1580 ntBASIC4.85□□□□□ -1.63
RIF1Q5UIP0 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC4.85□□□□□ -1.63
RIF1Q5UIP0 AC006210.2-201ENST00000367074 1545 ntBASIC4.85□□□□□ -1.63
RIF1Q5UIP0 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RIF1Q5UIP0 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
RIF1Q5UIP0 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
RIF1Q5UIP0 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RIF1Q5UIP0 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RIF1Q5UIP0 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.85□□□□□ -1.63
RIF1Q5UIP0 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.85□□□□□ -1.63
RIF1Q5UIP0 RRM2P4-201ENST00000441721 562 ntBASIC4.85□□□□□ -1.63
RIF1Q5UIP0 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC4.85□□□□□ -1.63
RIF1Q5UIP0 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.85□□□□□ -1.63
RIF1Q5UIP0 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.85□□□□□ -1.63
RIF1Q5UIP0 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.85□□□□□ -1.63
RIF1Q5UIP0 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.85□□□□□ -1.63
RIF1Q5UIP0 AC073091.2-201ENST00000603205 907 ntBASIC4.85□□□□□ -1.63
RIF1Q5UIP0 AC087821.1-201ENST00000623639 567 ntBASIC4.85□□□□□ -1.63
RIF1Q5UIP0 CDRT1-208ENST00000630868 794 ntBASIC4.85□□□□□ -1.63
RIF1Q5UIP0 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RIF1Q5UIP0 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.85□□□□□ -1.63
RIF1Q5UIP0 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC4.85□□□□□ -1.63
RIF1Q5UIP0 PARN-201ENST00000341484 2100 ntTSL 2 BASIC4.85□□□□□ -1.63
RIF1Q5UIP0 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RIF1Q5UIP0 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RIF1Q5UIP0 AL031651.1-201ENST00000615357 1438 ntBASIC4.85□□□□□ -1.63
RIF1Q5UIP0 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC4.85□□□□□ -1.63
RIF1Q5UIP0 AL672167.2-201ENST00000377164 879 ntBASIC4.85□□□□□ -1.63
RIF1Q5UIP0 RPS26P8-201ENST00000393490 348 ntBASIC4.85□□□□□ -1.63
RIF1Q5UIP0 AL356095.1-201ENST00000417217 199 ntBASIC4.85□□□□□ -1.63
RIF1Q5UIP0 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.85□□□□□ -1.63
RIF1Q5UIP0 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RIF1Q5UIP0 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.85□□□□□ -1.63
RIF1Q5UIP0 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.85□□□□□ -1.63
RIF1Q5UIP0 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC4.85□□□□□ -1.63
RIF1Q5UIP0 AF131215.7-201ENST00000602443 707 ntBASIC4.85□□□□□ -1.63
RIF1Q5UIP0 AL160281.1-201ENST00000605307 311 ntBASIC4.85□□□□□ -1.63
RIF1Q5UIP0 AL133481.2-203ENST00000607558 139 ntBASIC4.85□□□□□ -1.63
RIF1Q5UIP0 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.85□□□□□ -1.63
RIF1Q5UIP0 AC006511.3-201ENST00000624929 1783 ntBASIC4.85□□□□□ -1.63
RIF1Q5UIP0 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
RIF1Q5UIP0 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
RIF1Q5UIP0 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.85□□□□□ -1.63
RIF1Q5UIP0 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC4.85□□□□□ -1.63
RIF1Q5UIP0 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RIF1Q5UIP0 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RIF1Q5UIP0 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC4.85□□□□□ -1.63
RIF1Q5UIP0 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RIF1Q5UIP0 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RIF1Q5UIP0 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.63
RIF1Q5UIP0 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
RIF1Q5UIP0 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC4.84□□□□□ -1.63
RIF1Q5UIP0 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.84□□□□□ -1.63
RIF1Q5UIP0 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.84□□□□□ -1.63
RIF1Q5UIP0 OR5D2P-201ENST00000524390 911 ntBASIC4.84□□□□□ -1.63
RIF1Q5UIP0 ARF4P1-201ENST00000605447 541 ntBASIC4.84□□□□□ -1.63
RIF1Q5UIP0 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RIF1Q5UIP0 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
RIF1Q5UIP0 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC4.84□□□□□ -1.63
RIF1Q5UIP0 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.84□□□□□ -1.63
RIF1Q5UIP0 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RIF1Q5UIP0 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RIF1Q5UIP0 AL359715.3-201ENST00000569267 2123 ntBASIC4.84□□□□□ -1.63
RIF1Q5UIP0 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC4.84□□□□□ -1.63
RIF1Q5UIP0 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RIF1Q5UIP0 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC4.84□□□□□ -1.63
RIF1Q5UIP0 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RIF1Q5UIP0 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RIF1Q5UIP0 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
RIF1Q5UIP0 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
RIF1Q5UIP0 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RIF1Q5UIP0 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
RIF1Q5UIP0 SNORA63.1-201ENST00000362493 131 ntBASIC4.84□□□□□ -1.64
RIF1Q5UIP0 SNORA73.1-201ENST00000363107 205 ntBASIC4.84□□□□□ -1.64
RIF1Q5UIP0 UQCRBP1-201ENST00000421129 336 ntBASIC4.84□□□□□ -1.64
RIF1Q5UIP0 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC4.84□□□□□ -1.64
RIF1Q5UIP0 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.84□□□□□ -1.64
RIF1Q5UIP0 AC079168.2-201ENST00000453977 416 ntBASIC4.84□□□□□ -1.64
RIF1Q5UIP0 RPL12P39-201ENST00000455456 496 ntBASIC4.84□□□□□ -1.64
RIF1Q5UIP0 RPL7P15-201ENST00000461190 712 ntBASIC4.84□□□□□ -1.64
RIF1Q5UIP0 RN7SL303P-201ENST00000469773 251 ntBASIC4.84□□□□□ -1.64
RIF1Q5UIP0 AC023632.4-201ENST00000517783 191 ntBASIC4.84□□□□□ -1.64
RIF1Q5UIP0 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC4.84□□□□□ -1.64
RIF1Q5UIP0 AC019322.1-201ENST00000571869 389 ntBASIC4.84□□□□□ -1.64
RIF1Q5UIP0 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
RIF1Q5UIP0 RN7SL176P-201ENST00000580352 264 ntBASIC4.84□□□□□ -1.64
RIF1Q5UIP0 SNORD91A-202ENST00000609620 191 ntBASIC4.84□□□□□ -1.64
RIF1Q5UIP0 MIR6867-201ENST00000610636 67 ntBASIC4.84□□□□□ -1.64
RIF1Q5UIP0 AL356863.1-201ENST00000623378 1080 ntBASIC4.84□□□□□ -1.64
RIF1Q5UIP0 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
RIF1Q5UIP0 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
RIF1Q5UIP0 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.64
RIF1Q5UIP0 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
RIF1Q5UIP0 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
RIF1Q5UIP0 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RIF1Q5UIP0 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
RIF1Q5UIP0 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RIF1Q5UIP0 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RIF1Q5UIP0 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RIF1Q5UIP0 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms