Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 RPS3AP2-201ENST00000407190 754 ntBASIC4.54□□□□□ -1.68
CX3CL1P78423 GPS2P1-201ENST00000411761 986 ntBASIC4.54□□□□□ -1.68
CX3CL1P78423 AC105402.1-201ENST00000413336 545 ntBASIC4.54□□□□□ -1.68
CX3CL1P78423 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.54□□□□□ -1.68
CX3CL1P78423 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.54□□□□□ -1.68
CX3CL1P78423 RPL12P18-201ENST00000437175 325 ntBASIC4.54□□□□□ -1.68
CX3CL1P78423 AL138899.2-201ENST00000439139 499 ntBASIC4.54□□□□□ -1.68
CX3CL1P78423 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.54□□□□□ -1.68
CX3CL1P78423 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC4.54□□□□□ -1.68
CX3CL1P78423 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.54□□□□□ -1.68
CX3CL1P78423 CBX1P2-201ENST00000453841 458 ntBASIC4.54□□□□□ -1.68
CX3CL1P78423 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC4.54□□□□□ -1.68
CX3CL1P78423 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC4.54□□□□□ -1.68
CX3CL1P78423 AC094085.1-201ENST00000468914 584 ntBASIC4.54□□□□□ -1.68
CX3CL1P78423 RPS17P11-201ENST00000474297 293 ntBASIC4.54□□□□□ -1.68
CX3CL1P78423 AC022215.1-201ENST00000481770 362 ntBASIC4.54□□□□□ -1.68
CX3CL1P78423 RPL32P33-201ENST00000487023 394 ntBASIC4.54□□□□□ -1.68
CX3CL1P78423 TPT1P3-201ENST00000492841 512 ntBASIC4.54□□□□□ -1.68
CX3CL1P78423 AC009120.1-201ENST00000493458 473 ntBASIC4.54□□□□□ -1.68
CX3CL1P78423 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC4.54□□□□□ -1.68
CX3CL1P78423 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.54□□□□□ -1.68
CX3CL1P78423 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.54□□□□□ -1.68
CX3CL1P78423 RNU6-415P-201ENST00000516252 97 ntBASIC4.54□□□□□ -1.68
CX3CL1P78423 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC4.54□□□□□ -1.68
CX3CL1P78423 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.54□□□□□ -1.68
CX3CL1P78423 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.54□□□□□ -1.68
CX3CL1P78423 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
CX3CL1P78423 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC4.54□□□□□ -1.68
CX3CL1P78423 AC087894.1-201ENST00000538359 518 ntBASIC4.54□□□□□ -1.68
CX3CL1P78423 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CX3CL1P78423 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.54□□□□□ -1.68
CX3CL1P78423 AP003717.3-201ENST00000544832 1180 ntBASIC4.54□□□□□ -1.68
CX3CL1P78423 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CX3CL1P78423 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC4.54□□□□□ -1.68
CX3CL1P78423 CD24P2-201ENST00000565486 219 ntBASIC4.54□□□□□ -1.68
CX3CL1P78423 AC023825.1-201ENST00000566704 1030 ntBASIC4.54□□□□□ -1.68
CX3CL1P78423 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.54□□□□□ -1.68
CX3CL1P78423 NDUFA5P11-201ENST00000567995 343 ntBASIC4.54□□□□□ -1.68
CX3CL1P78423 AC245884.10-201ENST00000597355 337 ntBASIC4.54□□□□□ -1.68
CX3CL1P78423 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC4.54□□□□□ -1.68
CX3CL1P78423 AC006363.1-201ENST00000603806 463 ntBASIC4.54□□□□□ -1.68
CX3CL1P78423 AC112503.1-201ENST00000608436 391 ntBASIC4.54□□□□□ -1.68
CX3CL1P78423 AL365181.4-201ENST00000609800 547 ntBASIC4.54□□□□□ -1.68
CX3CL1P78423 AC016597.2-201ENST00000613256 341 ntBASIC4.54□□□□□ -1.68
CX3CL1P78423 MIR6133-201ENST00000617057 108 ntBASIC4.54□□□□□ -1.68
CX3CL1P78423 MIR6778-201ENST00000617912 73 ntBASIC4.54□□□□□ -1.68
CX3CL1P78423 AC074140.1-201ENST00000621617 208 ntBASIC4.54□□□□□ -1.68
CX3CL1P78423 AC007342.8-201ENST00000623278 678 ntBASIC4.54□□□□□ -1.68
CX3CL1P78423 AC090772.4-201ENST00000623599 362 ntBASIC4.54□□□□□ -1.68
CX3CL1P78423 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC4.54□□□□□ -1.68
CX3CL1P78423 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
CX3CL1P78423 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CX3CL1P78423 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CX3CL1P78423 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CX3CL1P78423 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
CX3CL1P78423 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CX3CL1P78423 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
CX3CL1P78423 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
CX3CL1P78423 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CX3CL1P78423 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
CX3CL1P78423 VN2R3P-201ENST00000422626 1412 ntBASIC4.54□□□□□ -1.68
CX3CL1P78423 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CX3CL1P78423 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.54□□□□□ -1.68
CX3CL1P78423 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CX3CL1P78423 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CX3CL1P78423 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.53□□□□□ -1.68
CX3CL1P78423 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CX3CL1P78423 HSPA8P17-201ENST00000427029 1382 ntBASIC4.53□□□□□ -1.68
CX3CL1P78423 AC092376.2-201ENST00000622621 4116 ntBASIC4.53□□□□□ -1.68
CX3CL1P78423 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CX3CL1P78423 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.53□□□□□ -1.68
CX3CL1P78423 AC007842.1-201ENST00000597336 2039 ntBASIC4.53□□□□□ -1.68
CX3CL1P78423 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CX3CL1P78423 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CX3CL1P78423 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.53□□□□□ -1.68
CX3CL1P78423 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.53□□□□□ -1.68
CX3CL1P78423 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CX3CL1P78423 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.53□□□□□ -1.68
CX3CL1P78423 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CX3CL1P78423 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CX3CL1P78423 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CX3CL1P78423 OR52B3P-201ENST00000314715 928 ntBASIC4.53□□□□□ -1.68
CX3CL1P78423 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CX3CL1P78423 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CX3CL1P78423 MIR375-201ENST00000362103 64 ntBASIC4.53□□□□□ -1.68
CX3CL1P78423 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.53□□□□□ -1.68
CX3CL1P78423 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.53□□□□□ -1.68
CX3CL1P78423 RNU1-136P-201ENST00000384181 164 ntBASIC4.53□□□□□ -1.68
CX3CL1P78423 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
CX3CL1P78423 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CX3CL1P78423 RMRPP5-201ENST00000411156 267 ntBASIC4.53□□□□□ -1.68
CX3CL1P78423 SLC20A1P1-201ENST00000413906 956 ntBASIC4.53□□□□□ -1.68
CX3CL1P78423 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.53□□□□□ -1.68
CX3CL1P78423 AL022331.1-201ENST00000429025 477 ntBASIC4.53□□□□□ -1.68
CX3CL1P78423 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
CX3CL1P78423 HMGB3P24-201ENST00000433260 622 ntBASIC4.53□□□□□ -1.68
CX3CL1P78423 RPS7P2-201ENST00000435134 607 ntBASIC4.53□□□□□ -1.68
CX3CL1P78423 AC242426.1-201ENST00000435270 960 ntBASIC4.53□□□□□ -1.68
CX3CL1P78423 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC4.53□□□□□ -1.68
CX3CL1P78423 RPS23P9-201ENST00000448848 438 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms