Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
VBP1P61758 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VBP1P61758 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
VBP1P61758 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VBP1P61758 FGG-201ENST00000336098 1659 ntTSL 2 BASIC4.51□□□□□ -1.69
VBP1P61758 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VBP1P61758 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VBP1P61758 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
VBP1P61758 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VBP1P61758 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VBP1P61758 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.5□□□□□ -1.69
VBP1P61758 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VBP1P61758 DDX18P5-201ENST00000534547 1306 ntBASIC4.5□□□□□ -1.69
VBP1P61758 OR11H5P-202ENST00000641612 1325 ntBASIC4.5□□□□□ -1.69
VBP1P61758 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.5□□□□□ -1.69
VBP1P61758 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VBP1P61758 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VBP1P61758 AC114786.1-201ENST00000512892 1415 ntBASIC4.5□□□□□ -1.69
VBP1P61758 RNU1-150P-201ENST00000362491 162 ntBASIC4.5□□□□□ -1.69
VBP1P61758 RNU1-83P-201ENST00000363426 164 ntBASIC4.5□□□□□ -1.69
VBP1P61758 SNORA66-201ENST00000384792 133 ntBASIC4.5□□□□□ -1.69
VBP1P61758 MIR195-201ENST00000385194 87 ntBASIC4.5□□□□□ -1.69
VBP1P61758 OR8V1P-201ENST00000395193 873 ntBASIC4.5□□□□□ -1.69
VBP1P61758 OR4K12P-201ENST00000406538 961 ntBASIC4.5□□□□□ -1.69
VBP1P61758 SEPT7P8-201ENST00000413308 775 ntBASIC4.5□□□□□ -1.69
VBP1P61758 QRSL1P2-201ENST00000418582 964 ntBASIC4.5□□□□□ -1.69
VBP1P61758 RWDD4P2-201ENST00000426392 563 ntBASIC4.5□□□□□ -1.69
VBP1P61758 AC092646.1-201ENST00000427142 901 ntBASIC4.5□□□□□ -1.69
VBP1P61758 PNKDP1-201ENST00000435914 430 ntBASIC4.5□□□□□ -1.69
VBP1P61758 RPL12P46-201ENST00000436610 195 ntBASIC4.5□□□□□ -1.69
VBP1P61758 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.5□□□□□ -1.69
VBP1P61758 ATP6V1E1P1-201ENST00000439215 681 ntBASIC4.5□□□□□ -1.69
VBP1P61758 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC4.5□□□□□ -1.69
VBP1P61758 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.5□□□□□ -1.69
VBP1P61758 AL121877.1-201ENST00000453704 622 ntBASIC4.5□□□□□ -1.69
VBP1P61758 RWDD4P1-201ENST00000488019 565 ntBASIC4.5□□□□□ -1.69
VBP1P61758 RN7SL362P-201ENST00000494228 267 ntBASIC4.5□□□□□ -1.69
VBP1P61758 RPS4XP18-201ENST00000495480 763 ntBASIC4.5□□□□□ -1.69
VBP1P61758 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC4.5□□□□□ -1.69
VBP1P61758 RNA5SP438-201ENST00000516561 112 ntBASIC4.5□□□□□ -1.69
VBP1P61758 DEFB109D-201ENST00000529497 240 ntBASIC4.5□□□□□ -1.69
VBP1P61758 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VBP1P61758 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.5□□□□□ -1.69
VBP1P61758 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.5□□□□□ -1.69
VBP1P61758 GSTP1P1-201ENST00000548078 319 ntBASIC4.5□□□□□ -1.69
VBP1P61758 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC4.5□□□□□ -1.69
VBP1P61758 AC234782.5-201ENST00000617723 324 ntBASIC4.5□□□□□ -1.69
VBP1P61758 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
VBP1P61758 AL121950.1-201ENST00000624993 2077 ntBASIC4.5□□□□□ -1.69
VBP1P61758 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.5□□□□□ -1.69
VBP1P61758 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.5□□□□□ -1.69
VBP1P61758 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
VBP1P61758 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VBP1P61758 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
VBP1P61758 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
VBP1P61758 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
VBP1P61758 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VBP1P61758 MAPK10-303ENST00000641324 3959 ntBASIC4.49□□□□□ -1.69
VBP1P61758 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
VBP1P61758 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.49□□□□□ -1.69
VBP1P61758 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VBP1P61758 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
VBP1P61758 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
VBP1P61758 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC4.49□□□□□ -1.69
VBP1P61758 RNA5SP273-201ENST00000362484 113 ntBASIC4.49□□□□□ -1.69
VBP1P61758 RNA5SP132-201ENST00000364725 118 ntBASIC4.49□□□□□ -1.69
VBP1P61758 AL603766.1-201ENST00000407763 664 ntBASIC4.49□□□□□ -1.69
VBP1P61758 LSM5-203ENST00000409782 649 ntTSL 5 BASIC4.49□□□□□ -1.69
VBP1P61758 SLC20A1P1-201ENST00000413906 956 ntBASIC4.49□□□□□ -1.69
VBP1P61758 AC009237.10-201ENST00000414112 510 ntBASIC4.49□□□□□ -1.69
VBP1P61758 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.49□□□□□ -1.69
VBP1P61758 AL133173.1-201ENST00000423458 397 ntBASIC4.49□□□□□ -1.69
VBP1P61758 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.49□□□□□ -1.69
VBP1P61758 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.49□□□□□ -1.69
VBP1P61758 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC4.49□□□□□ -1.69
VBP1P61758 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC4.49□□□□□ -1.69
VBP1P61758 RN7SL817P-201ENST00000480777 288 ntBASIC4.49□□□□□ -1.69
VBP1P61758 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.49□□□□□ -1.69
VBP1P61758 LDHAP1-201ENST00000509421 992 ntBASIC4.49□□□□□ -1.69
VBP1P61758 AC134698.1-201ENST00000511619 643 ntBASIC4.49□□□□□ -1.69
VBP1P61758 RNU6-615P-201ENST00000516065 106 ntBASIC4.49□□□□□ -1.69
VBP1P61758 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
VBP1P61758 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC4.49□□□□□ -1.69
VBP1P61758 AC107958.1-201ENST00000556576 290 ntBASIC4.49□□□□□ -1.69
VBP1P61758 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.49□□□□□ -1.69
VBP1P61758 HNRNPCP4-201ENST00000571636 900 ntBASIC4.49□□□□□ -1.69
VBP1P61758 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VBP1P61758 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VBP1P61758 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.49□□□□□ -1.69
VBP1P61758 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC4.49□□□□□ -1.69
VBP1P61758 AL139041.1-201ENST00000605480 610 ntBASIC4.49□□□□□ -1.69
VBP1P61758 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.49□□□□□ -1.69
VBP1P61758 CU639417.4-201ENST00000623928 207 ntBASIC4.49□□□□□ -1.69
VBP1P61758 OR8G3P-202ENST00000641572 1255 ntBASIC4.49□□□□□ -1.69
VBP1P61758 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
VBP1P61758 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.49□□□□□ -1.69
VBP1P61758 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.49□□□□□ -1.69
VBP1P61758 KPNA2P2-201ENST00000419546 1489 ntBASIC4.49□□□□□ -1.69
VBP1P61758 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VBP1P61758 PNPT1P2-201ENST00000456768 2050 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms