Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC3.82□□□□□ -1.8
CMC4P56277 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC3.82□□□□□ -1.8
CMC4P56277 TVP23CP2-201ENST00000571473 623 ntBASIC3.82□□□□□ -1.8
CMC4P56277 AC022884.2-201ENST00000578535 580 ntBASIC3.82□□□□□ -1.8
CMC4P56277 AC006116.3-201ENST00000592968 361 ntBASIC3.82□□□□□ -1.8
CMC4P56277 AC011487.3-201ENST00000593607 453 ntBASIC3.82□□□□□ -1.8
CMC4P56277 BNIP3P35-201ENST00000604530 490 ntBASIC3.82□□□□□ -1.8
CMC4P56277 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC3.82□□□□□ -1.8
CMC4P56277 AL451049.1-201ENST00000608672 497 ntBASIC3.82□□□□□ -1.8
CMC4P56277 AL159169.2-201ENST00000610061 1269 ntBASIC3.82□□□□□ -1.8
CMC4P56277 SDR42E1P1-201ENST00000611327 477 ntBASIC3.82□□□□□ -1.8
CMC4P56277 AP000648.2-201ENST00000624182 404 ntBASIC3.82□□□□□ -1.8
CMC4P56277 MTCO1P1-201ENST00000624263 1081 ntBASIC3.82□□□□□ -1.8
CMC4P56277 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC3.82□□□□□ -1.8
CMC4P56277 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC3.82□□□□□ -1.8
CMC4P56277 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CMC4P56277 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC3.82□□□□□ -1.8
CMC4P56277 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC3.82□□□□□ -1.8
CMC4P56277 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CMC4P56277 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
CMC4P56277 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC3.82□□□□□ -1.8
CMC4P56277 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC3.82□□□□□ -1.8
CMC4P56277 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CMC4P56277 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CMC4P56277 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
CMC4P56277 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CMC4P56277 AP000432.2-201ENST00000624164 2048 ntBASIC3.82□□□□□ -1.8
CMC4P56277 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CMC4P56277 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CMC4P56277 MRRFP1-201ENST00000435941 1675 ntBASIC3.81□□□□□ -1.8
CMC4P56277 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC3.81□□□□□ -1.8
CMC4P56277 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
CMC4P56277 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC3.81□□□□□ -1.8
CMC4P56277 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CMC4P56277 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CMC4P56277 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CMC4P56277 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
CMC4P56277 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
CMC4P56277 SNORA2.3-201ENST00000383920 135 ntBASIC3.81□□□□□ -1.8
CMC4P56277 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CMC4P56277 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CMC4P56277 AL078599.1-201ENST00000402075 293 ntBASIC3.81□□□□□ -1.8
CMC4P56277 AL035079.1-201ENST00000405210 287 ntBASIC3.81□□□□□ -1.8
CMC4P56277 MRM2-202ENST00000407040 582 ntTSL 3 BASIC3.81□□□□□ -1.8
CMC4P56277 RN7SKP114-201ENST00000410327 279 ntBASIC3.81□□□□□ -1.8
CMC4P56277 RPL35AP24-201ENST00000413846 330 ntBASIC3.81□□□□□ -1.8
CMC4P56277 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC3.81□□□□□ -1.8
CMC4P56277 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC3.81□□□□□ -1.8
CMC4P56277 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC3.81□□□□□ -1.8
CMC4P56277 MTCO1P51-201ENST00000427672 1060 ntBASIC3.81□□□□□ -1.8
CMC4P56277 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC3.81□□□□□ -1.8
CMC4P56277 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC3.81□□□□□ -1.8
CMC4P56277 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC3.81□□□□□ -1.8
CMC4P56277 AC073850.1-201ENST00000449243 255 ntBASIC3.81□□□□□ -1.8
CMC4P56277 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC3.81□□□□□ -1.8
CMC4P56277 AC090602.1-201ENST00000469695 252 ntBASIC3.81□□□□□ -1.8
CMC4P56277 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CMC4P56277 HMGN2P25-201ENST00000486956 268 ntBASIC3.81□□□□□ -1.8
CMC4P56277 AP000926.3-201ENST00000497201 299 ntBASIC3.81□□□□□ -1.8
CMC4P56277 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC3.81□□□□□ -1.8
CMC4P56277 MORF4L2P1-201ENST00000503761 858 ntBASIC3.81□□□□□ -1.8
CMC4P56277 AC093763.2-201ENST00000505334 1223 ntBASIC3.81□□□□□ -1.8
CMC4P56277 AC008638.1-201ENST00000506035 866 ntBASIC3.81□□□□□ -1.8
CMC4P56277 COX6B1P5-201ENST00000509843 249 ntBASIC3.81□□□□□ -1.8
CMC4P56277 SNORD116-30-201ENST00000516468 85 ntBASIC3.81□□□□□ -1.8
CMC4P56277 Y_RNA.719-201ENST00000517156 106 ntBASIC3.81□□□□□ -1.8
CMC4P56277 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC3.81□□□□□ -1.8
CMC4P56277 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC3.81□□□□□ -1.8
CMC4P56277 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC3.81□□□□□ -1.8
CMC4P56277 AP000859.1-201ENST00000525536 307 ntBASIC3.81□□□□□ -1.8
CMC4P56277 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC3.81□□□□□ -1.8
CMC4P56277 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC3.81□□□□□ -1.8
CMC4P56277 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC3.81□□□□□ -1.8
CMC4P56277 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC3.81□□□□□ -1.8
CMC4P56277 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC3.81□□□□□ -1.8
CMC4P56277 AC087783.2-201ENST00000605070 562 ntBASIC3.81□□□□□ -1.8
CMC4P56277 AC092944.2-201ENST00000605443 889 ntBASIC3.81□□□□□ -1.8
CMC4P56277 RPSAP73-201ENST00000614820 330 ntBASIC3.81□□□□□ -1.8
CMC4P56277 AC026367.3-201ENST00000619032 590 ntBASIC3.81□□□□□ -1.8
CMC4P56277 AL158062.1-201ENST00000619632 745 ntBASIC3.81□□□□□ -1.8
CMC4P56277 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CMC4P56277 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
CMC4P56277 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CMC4P56277 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
CMC4P56277 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CMC4P56277 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CMC4P56277 AC139713.2-215ENST00000641428 5037 ntBASIC3.81□□□□□ -1.8
CMC4P56277 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CMC4P56277 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CMC4P56277 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
CMC4P56277 BMPR1APS1-201ENST00000403332 1598 ntBASIC3.8□□□□□ -1.8
CMC4P56277 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CMC4P56277 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CMC4P56277 RMST-209ENST00000639542 3269 ntTSL 5 BASIC3.8□□□□□ -1.8
CMC4P56277 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC3.8□□□□□ -1.8
CMC4P56277 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC3.8□□□□□ -1.8
CMC4P56277 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CMC4P56277 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC3.8□□□□□ -1.8
CMC4P56277 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC3.8□□□□□ -1.8
CMC4P56277 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms