Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 RN7SL727P-201ENST00000482164 296 ntBASIC5.61□□□□□ -1.51
CDH8P55286 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.61□□□□□ -1.51
CDH8P55286 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.61□□□□□ -1.51
CDH8P55286 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.61□□□□□ -1.51
CDH8P55286 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.61□□□□□ -1.51
CDH8P55286 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.61□□□□□ -1.51
CDH8P55286 AC134349.2-201ENST00000535136 910 ntBASIC5.61□□□□□ -1.51
CDH8P55286 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CDH8P55286 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.61□□□□□ -1.51
CDH8P55286 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.61□□□□□ -1.51
CDH8P55286 RPL21P136-201ENST00000605378 396 ntBASIC5.61□□□□□ -1.51
CDH8P55286 AL355802.4-201ENST00000607635 548 ntBASIC5.61□□□□□ -1.51
CDH8P55286 AC004241.3-201ENST00000611728 517 ntBASIC5.61□□□□□ -1.51
CDH8P55286 CR589904.2-201ENST00000612533 440 ntBASIC5.61□□□□□ -1.51
CDH8P55286 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.61□□□□□ -1.51
CDH8P55286 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.61□□□□□ -1.51
CDH8P55286 AC090527.3-201ENST00000619041 548 ntBASIC5.61□□□□□ -1.51
CDH8P55286 RNU6-368P-201ENST00000620928 107 ntBASIC5.61□□□□□ -1.51
CDH8P55286 RNU6-538P-201ENST00000622329 107 ntBASIC5.61□□□□□ -1.51
CDH8P55286 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDH8P55286 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.61□□□□□ -1.51
CDH8P55286 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
CDH8P55286 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CDH8P55286 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDH8P55286 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.61□□□□□ -1.51
CDH8P55286 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDH8P55286 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.61□□□□□ -1.51
CDH8P55286 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDH8P55286 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDH8P55286 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
CDH8P55286 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
CDH8P55286 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.6□□□□□ -1.51
CDH8P55286 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.6□□□□□ -1.51
CDH8P55286 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CDH8P55286 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CDH8P55286 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDH8P55286 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
CDH8P55286 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDH8P55286 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDH8P55286 MIR133A2-201ENST00000347538 102 ntBASIC5.6□□□□□ -1.51
CDH8P55286 RNA5SP90-201ENST00000364801 99 ntBASIC5.6□□□□□ -1.51
CDH8P55286 SNORD51.1-201ENST00000365405 77 ntBASIC5.6□□□□□ -1.51
CDH8P55286 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC5.6□□□□□ -1.51
CDH8P55286 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CDH8P55286 RNU6-729P-201ENST00000384399 107 ntBASIC5.6□□□□□ -1.51
CDH8P55286 MIR600-201ENST00000385007 98 ntBASIC5.6□□□□□ -1.51
CDH8P55286 RNU2-72P-201ENST00000411175 163 ntBASIC5.6□□□□□ -1.51
CDH8P55286 RN7SKP273-201ENST00000411392 314 ntBASIC5.6□□□□□ -1.51
CDH8P55286 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.6□□□□□ -1.51
CDH8P55286 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.6□□□□□ -1.51
CDH8P55286 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.6□□□□□ -1.51
CDH8P55286 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.6□□□□□ -1.51
CDH8P55286 MTND2P21-201ENST00000436242 1042 ntBASIC5.6□□□□□ -1.51
CDH8P55286 MTCYBP29-201ENST00000436327 1006 ntBASIC5.6□□□□□ -1.51
CDH8P55286 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.6□□□□□ -1.51
CDH8P55286 EEF1B2P5-201ENST00000444820 548 ntBASIC5.6□□□□□ -1.51
CDH8P55286 Z92846.1-201ENST00000456203 268 ntBASIC5.6□□□□□ -1.51
CDH8P55286 AC079168.1-201ENST00000458741 345 ntBASIC5.6□□□□□ -1.51
CDH8P55286 RPS12P31-201ENST00000491419 398 ntBASIC5.6□□□□□ -1.51
CDH8P55286 AC093763.2-201ENST00000505334 1223 ntBASIC5.6□□□□□ -1.51
CDH8P55286 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.6□□□□□ -1.51
CDH8P55286 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
CDH8P55286 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.6□□□□□ -1.51
CDH8P55286 AC034244.2-201ENST00000514668 858 ntBASIC5.6□□□□□ -1.51
CDH8P55286 AC097486.1-201ENST00000515331 210 ntBASIC5.6□□□□□ -1.51
CDH8P55286 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.6□□□□□ -1.51
CDH8P55286 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDH8P55286 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDH8P55286 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.6□□□□□ -1.51
CDH8P55286 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDH8P55286 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC5.6□□□□□ -1.51
CDH8P55286 SNX6P1-201ENST00000601728 1224 ntBASIC5.6□□□□□ -1.51
CDH8P55286 AC092474.3-201ENST00000603022 568 ntBASIC5.6□□□□□ -1.51
CDH8P55286 AC008814.1-201ENST00000603797 406 ntBASIC5.6□□□□□ -1.51
CDH8P55286 AC009597.2-201ENST00000604659 592 ntBASIC5.6□□□□□ -1.51
CDH8P55286 AL121612.2-201ENST00000612261 482 ntBASIC5.6□□□□□ -1.51
CDH8P55286 AC037198.3-201ENST00000616754 526 ntBASIC5.6□□□□□ -1.51
CDH8P55286 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDH8P55286 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CDH8P55286 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CDH8P55286 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDH8P55286 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CDH8P55286 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDH8P55286 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDH8P55286 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.59□□□□□ -1.51
CDH8P55286 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.59□□□□□ -1.51
CDH8P55286 AL450345.1-202ENST00000605741 3881 ntBASIC5.59□□□□□ -1.51
CDH8P55286 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.59□□□□□ -1.51
CDH8P55286 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDH8P55286 AP000473.2-201ENST00000602659 1537 ntBASIC5.59□□□□□ -1.51
CDH8P55286 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.59□□□□□ -1.51
CDH8P55286 AC132825.1-201ENST00000463573 2247 ntBASIC5.59□□□□□ -1.51
CDH8P55286 AC109446.4-201ENST00000623235 2755 ntBASIC5.59□□□□□ -1.51
CDH8P55286 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.59□□□□□ -1.51
CDH8P55286 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CDH8P55286 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDH8P55286 OR1L6-202ENST00000373684 1044 ntBASIC5.59□□□□□ -1.51
CDH8P55286 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CDH8P55286 MIR589-201ENST00000385238 99 ntBASIC5.59□□□□□ -1.51
CDH8P55286 RNA5SP241-201ENST00000391326 114 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms