Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDH6P55285 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDH6P55285 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDH6P55285 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CDH6P55285 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CDH6P55285 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CDH6P55285 SNORA70.10-201ENST00000384515 134 ntBASIC5.22□□□□□ -1.57
CDH6P55285 MIR323B-201ENST00000385269 82 ntBASIC5.22□□□□□ -1.57
CDH6P55285 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.22□□□□□ -1.57
CDH6P55285 AC005033.1-201ENST00000428904 813 ntBASIC5.22□□□□□ -1.57
CDH6P55285 AL450023.3-201ENST00000440592 271 ntBASIC5.22□□□□□ -1.57
CDH6P55285 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.22□□□□□ -1.57
CDH6P55285 AL163193.1-201ENST00000444895 788 ntBASIC5.22□□□□□ -1.57
CDH6P55285 AL354714.3-201ENST00000447284 493 ntBASIC5.22□□□□□ -1.57
CDH6P55285 AL691482.1-201ENST00000453255 87 ntBASIC5.22□□□□□ -1.57
CDH6P55285 HMGB1P4-201ENST00000455362 567 ntBASIC5.22□□□□□ -1.57
CDH6P55285 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.22□□□□□ -1.57
CDH6P55285 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.22□□□□□ -1.57
CDH6P55285 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.22□□□□□ -1.57
CDH6P55285 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.22□□□□□ -1.57
CDH6P55285 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.22□□□□□ -1.57
CDH6P55285 AGGF1P9-201ENST00000561884 913 ntBASIC5.22□□□□□ -1.57
CDH6P55285 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.22□□□□□ -1.57
CDH6P55285 AC011447.4-201ENST00000587562 111 ntBASIC5.22□□□□□ -1.57
CDH6P55285 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.22□□□□□ -1.57
CDH6P55285 TAS2R6P-201ENST00000605022 826 ntBASIC5.22□□□□□ -1.57
CDH6P55285 AC073575.2-201ENST00000614212 627 ntBASIC5.22□□□□□ -1.57
CDH6P55285 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.22□□□□□ -1.57
CDH6P55285 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.22□□□□□ -1.57
CDH6P55285 SAMMSON-227ENST00000642114 1199 ntBASIC5.22□□□□□ -1.57
CDH6P55285 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CDH6P55285 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDH6P55285 AL022322.2-201ENST00000624072 20397 ntBASIC5.22□□□□□ -1.57
CDH6P55285 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CDH6P55285 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDH6P55285 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CDH6P55285 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CDH6P55285 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDH6P55285 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDH6P55285 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.22□□□□□ -1.57
CDH6P55285 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CDH6P55285 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.22□□□□□ -1.57
CDH6P55285 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CDH6P55285 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
CDH6P55285 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.21□□□□□ -1.57
CDH6P55285 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.21□□□□□ -1.57
CDH6P55285 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
CDH6P55285 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
CDH6P55285 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
CDH6P55285 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.21□□□□□ -1.58
CDH6P55285 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CDH6P55285 LRRC37BP1-201ENST00000398851 714 ntBASIC5.21□□□□□ -1.58
CDH6P55285 AL589994.1-201ENST00000404962 340 ntBASIC5.21□□□□□ -1.58
CDH6P55285 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.21□□□□□ -1.58
CDH6P55285 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.21□□□□□ -1.58
CDH6P55285 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.21□□□□□ -1.58
CDH6P55285 RPS29P9-201ENST00000440360 171 ntBASIC5.21□□□□□ -1.58
CDH6P55285 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.21□□□□□ -1.58
CDH6P55285 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.21□□□□□ -1.58
CDH6P55285 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.21□□□□□ -1.58
CDH6P55285 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.21□□□□□ -1.58
CDH6P55285 TCEA1P1-201ENST00000449716 880 ntBASIC5.21□□□□□ -1.58
CDH6P55285 IGHV5-78-201ENST00000450948 295 ntBASIC5.21□□□□□ -1.58
CDH6P55285 AL356981.1-201ENST00000454879 684 ntBASIC5.21□□□□□ -1.58
CDH6P55285 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.21□□□□□ -1.58
CDH6P55285 RPS4XP12-201ENST00000461747 709 ntBASIC5.21□□□□□ -1.58
CDH6P55285 RN7SL629P-201ENST00000489622 285 ntBASIC5.21□□□□□ -1.58
CDH6P55285 AC073073.1-201ENST00000493920 463 ntBASIC5.21□□□□□ -1.58
CDH6P55285 AC006499.3-201ENST00000506077 748 ntBASIC5.21□□□□□ -1.58
CDH6P55285 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.21□□□□□ -1.58
CDH6P55285 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.21□□□□□ -1.58
CDH6P55285 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.21□□□□□ -1.58
CDH6P55285 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.21□□□□□ -1.58
CDH6P55285 IGLV2-28-201ENST00000520681 304 ntBASIC5.21□□□□□ -1.58
CDH6P55285 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.21□□□□□ -1.58
CDH6P55285 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.21□□□□□ -1.58
CDH6P55285 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.21□□□□□ -1.58
CDH6P55285 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.21□□□□□ -1.58
CDH6P55285 HAUS8P1-201ENST00000549005 542 ntBASIC5.21□□□□□ -1.58
CDH6P55285 AL358913.1-201ENST00000554342 121 ntBASIC5.21□□□□□ -1.58
CDH6P55285 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.21□□□□□ -1.58
CDH6P55285 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.21□□□□□ -1.58
CDH6P55285 AC116553.2-201ENST00000564203 463 ntBASIC5.21□□□□□ -1.58
CDH6P55285 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.21□□□□□ -1.58
CDH6P55285 AC105254.2-201ENST00000603636 436 ntBASIC5.21□□□□□ -1.58
CDH6P55285 AL512624.1-201ENST00000613638 469 ntBASIC5.21□□□□□ -1.58
CDH6P55285 AL356752.1-201ENST00000615844 593 ntBASIC5.21□□□□□ -1.58
CDH6P55285 AC074140.1-201ENST00000621617 208 ntBASIC5.21□□□□□ -1.58
CDH6P55285 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.21□□□□□ -1.58
CDH6P55285 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.21□□□□□ -1.58
CDH6P55285 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CDH6P55285 AC112255.1-201ENST00000624070 2493 ntBASIC5.21□□□□□ -1.58
CDH6P55285 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CDH6P55285 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CDH6P55285 OR9K1P-202ENST00000641111 3217 ntBASIC5.21□□□□□ -1.58
CDH6P55285 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CDH6P55285 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CDH6P55285 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.21□□□□□ -1.58
CDH6P55285 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.21□□□□□ -1.58
CDH6P55285 CR383656.5-201ENST00000547616 1340 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 494.9 ms