Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.06□□□□□ -1.6
SOX2P48431 AL390318.1-201ENST00000624564 687 ntBASIC5.06□□□□□ -1.6
SOX2P48431 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.06□□□□□ -1.6
SOX2P48431 AP003399.1-201ENST00000637534 361 ntBASIC5.06□□□□□ -1.6
SOX2P48431 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.06□□□□□ -1.6
SOX2P48431 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SOX2P48431 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
SOX2P48431 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SOX2P48431 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SOX2P48431 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SOX2P48431 AC112198.2-201ENST00000426589 6996 ntBASIC5.06□□□□□ -1.6
SOX2P48431 AC015689.2-201ENST00000528172 1738 ntBASIC5.06□□□□□ -1.6
SOX2P48431 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
SOX2P48431 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.06□□□□□ -1.6
SOX2P48431 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
SOX2P48431 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SOX2P48431 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.05□□□□□ -1.6
SOX2P48431 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.05□□□□□ -1.6
SOX2P48431 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.05□□□□□ -1.6
SOX2P48431 PARP4P2-201ENST00000446672 3326 ntBASIC5.05□□□□□ -1.6
SOX2P48431 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
SOX2P48431 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.05□□□□□ -1.6
SOX2P48431 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
SOX2P48431 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SOX2P48431 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SOX2P48431 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SOX2P48431 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SOX2P48431 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SOX2P48431 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
SOX2P48431 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
SOX2P48431 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SOX2P48431 RNU1-136P-201ENST00000384181 164 ntBASIC5.05□□□□□ -1.6
SOX2P48431 Y_RNA.472-201ENST00000384322 102 ntBASIC5.05□□□□□ -1.6
SOX2P48431 RNU6-1242P-201ENST00000391052 103 ntBASIC5.05□□□□□ -1.6
SOX2P48431 MTCO1P56-201ENST00000401674 224 ntBASIC5.05□□□□□ -1.6
SOX2P48431 AP000357.1-201ENST00000409926 1165 ntBASIC5.05□□□□□ -1.6
SOX2P48431 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.05□□□□□ -1.6
SOX2P48431 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.05□□□□□ -1.6
SOX2P48431 RNGTTP1-201ENST00000420965 728 ntBASIC5.05□□□□□ -1.6
SOX2P48431 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.05□□□□□ -1.6
SOX2P48431 MRPS21P2-201ENST00000424704 264 ntBASIC5.05□□□□□ -1.6
SOX2P48431 PRUNEP1-201ENST00000425846 705 ntBASIC5.05□□□□□ -1.6
SOX2P48431 RPL23AP4-201ENST00000427757 463 ntBASIC5.05□□□□□ -1.6
SOX2P48431 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.05□□□□□ -1.6
SOX2P48431 AC092647.3-201ENST00000443044 633 ntBASIC5.05□□□□□ -1.6
SOX2P48431 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.05□□□□□ -1.6
SOX2P48431 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5.05□□□□□ -1.6
SOX2P48431 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.05□□□□□ -1.6
SOX2P48431 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.05□□□□□ -1.6
SOX2P48431 CASP3P1-201ENST00000446037 609 ntBASIC5.05□□□□□ -1.6
SOX2P48431 AL050341.1-201ENST00000447743 313 ntBASIC5.05□□□□□ -1.6
SOX2P48431 AL445466.1-201ENST00000448432 357 ntBASIC5.05□□□□□ -1.6
SOX2P48431 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.05□□□□□ -1.6
SOX2P48431 AC099670.1-201ENST00000455141 783 ntBASIC5.05□□□□□ -1.6
SOX2P48431 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.05□□□□□ -1.6
SOX2P48431 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC5.05□□□□□ -1.6
SOX2P48431 NDUFA5P9-201ENST00000472609 340 ntBASIC5.05□□□□□ -1.6
SOX2P48431 SNRPCP3-201ENST00000474888 476 ntBASIC5.05□□□□□ -1.6
SOX2P48431 AC011037.1-201ENST00000483964 558 ntBASIC5.05□□□□□ -1.6
SOX2P48431 AC073610.1-201ENST00000489971 396 ntBASIC5.05□□□□□ -1.6
SOX2P48431 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.05□□□□□ -1.6
SOX2P48431 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC5.05□□□□□ -1.6
SOX2P48431 OR5AK3P-201ENST00000527486 1297 ntBASIC5.05□□□□□ -1.6
SOX2P48431 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC5.05□□□□□ -1.6
SOX2P48431 MTCO2P15-201ENST00000532655 656 ntBASIC5.05□□□□□ -1.6
SOX2P48431 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.05□□□□□ -1.6
SOX2P48431 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.05□□□□□ -1.6
SOX2P48431 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SOX2P48431 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.05□□□□□ -1.6
SOX2P48431 ZNF321P-202ENST00000550843 495 ntBASIC5.05□□□□□ -1.6
SOX2P48431 OR11H3P-201ENST00000554547 982 ntBASIC5.05□□□□□ -1.6
SOX2P48431 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.05□□□□□ -1.6
SOX2P48431 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.05□□□□□ -1.6
SOX2P48431 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.05□□□□□ -1.6
SOX2P48431 AGGF1P6-201ENST00000569213 976 ntBASIC5.05□□□□□ -1.6
SOX2P48431 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC5.05□□□□□ -1.6
SOX2P48431 AC013468.1-201ENST00000608680 598 ntBASIC5.05□□□□□ -1.6
SOX2P48431 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC5.05□□□□□ -1.6
SOX2P48431 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC5.05□□□□□ -1.6
SOX2P48431 AL138478.1-201ENST00000612252 832 ntBASIC5.05□□□□□ -1.6
SOX2P48431 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC5.05□□□□□ -1.6
SOX2P48431 AC007786.3-201ENST00000615154 596 ntBASIC5.05□□□□□ -1.6
SOX2P48431 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.05□□□□□ -1.6
SOX2P48431 AL035661.1-201ENST00000620459 1144 ntBASIC5.05□□□□□ -1.6
SOX2P48431 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.05□□□□□ -1.6
SOX2P48431 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.05□□□□□ -1.6
SOX2P48431 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.05□□□□□ -1.6
SOX2P48431 AC007842.1-201ENST00000597336 2039 ntBASIC5.05□□□□□ -1.6
SOX2P48431 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
SOX2P48431 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
SOX2P48431 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SOX2P48431 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.05□□□□□ -1.6
SOX2P48431 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.05□□□□□ -1.6
SOX2P48431 RBPJP7-201ENST00000442803 1447 ntBASIC5.05□□□□□ -1.6
SOX2P48431 RBPJP5-201ENST00000449433 1447 ntBASIC5.05□□□□□ -1.6
SOX2P48431 AC012254.3-201ENST00000591183 2117 ntBASIC5.05□□□□□ -1.6
SOX2P48431 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SOX2P48431 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.05□□□□□ -1.6
SOX2P48431 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.05□□□□□ -1.6
SOX2P48431 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms