Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 HMGB1P47-201ENST00000511281 589 ntBASIC5.56□□□□□ -1.52
CTNNA1P35221 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.56□□□□□ -1.52
CTNNA1P35221 AC005363.1-201ENST00000530779 351 ntBASIC5.56□□□□□ -1.52
CTNNA1P35221 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.56□□□□□ -1.52
CTNNA1P35221 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CTNNA1P35221 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.56□□□□□ -1.52
CTNNA1P35221 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.56□□□□□ -1.52
CTNNA1P35221 AL162431.4-201ENST00000604674 411 ntBASIC5.56□□□□□ -1.52
CTNNA1P35221 AC100767.2-201ENST00000604840 693 ntBASIC5.56□□□□□ -1.52
CTNNA1P35221 AC015908.5-201ENST00000623289 343 ntBASIC5.56□□□□□ -1.52
CTNNA1P35221 AC006210.2-201ENST00000367074 1545 ntBASIC5.56□□□□□ -1.52
CTNNA1P35221 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CTNNA1P35221 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CTNNA1P35221 AL138820.1-201ENST00000617901 5305 ntBASIC5.56□□□□□ -1.52
CTNNA1P35221 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.56□□□□□ -1.52
CTNNA1P35221 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.56□□□□□ -1.52
CTNNA1P35221 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CTNNA1P35221 HSPD1P11-201ENST00000508643 1702 ntBASIC5.56□□□□□ -1.52
CTNNA1P35221 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
CTNNA1P35221 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CTNNA1P35221 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CTNNA1P35221 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.56□□□□□ -1.52
CTNNA1P35221 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.56□□□□□ -1.52
CTNNA1P35221 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CTNNA1P35221 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CTNNA1P35221 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CTNNA1P35221 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CTNNA1P35221 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CTNNA1P35221 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
CTNNA1P35221 AC000374.1-201ENST00000434698 1745 ntBASIC5.55□□□□□ -1.52
CTNNA1P35221 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.55□□□□□ -1.52
CTNNA1P35221 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
CTNNA1P35221 RNA5SP122-201ENST00000384457 108 ntBASIC5.55□□□□□ -1.52
CTNNA1P35221 AL391422.1-201ENST00000402155 436 ntBASIC5.55□□□□□ -1.52
CTNNA1P35221 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.55□□□□□ -1.52
CTNNA1P35221 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.55□□□□□ -1.52
CTNNA1P35221 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.55□□□□□ -1.52
CTNNA1P35221 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.55□□□□□ -1.52
CTNNA1P35221 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.55□□□□□ -1.52
CTNNA1P35221 AC002504.1-201ENST00000438281 691 ntBASIC5.55□□□□□ -1.52
CTNNA1P35221 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.55□□□□□ -1.52
CTNNA1P35221 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.55□□□□□ -1.52
CTNNA1P35221 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CTNNA1P35221 AC020779.1-201ENST00000478757 796 ntBASIC5.55□□□□□ -1.52
CTNNA1P35221 AC021087.2-201ENST00000504656 1203 ntBASIC5.55□□□□□ -1.52
CTNNA1P35221 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.55□□□□□ -1.52
CTNNA1P35221 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.55□□□□□ -1.52
CTNNA1P35221 RNU6-513P-201ENST00000516104 104 ntBASIC5.55□□□□□ -1.52
CTNNA1P35221 RN7SKP99-201ENST00000517028 307 ntBASIC5.55□□□□□ -1.52
CTNNA1P35221 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.55□□□□□ -1.52
CTNNA1P35221 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.55□□□□□ -1.52
CTNNA1P35221 AC068714.1-201ENST00000559623 800 ntBASIC5.55□□□□□ -1.52
CTNNA1P35221 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CTNNA1P35221 MTATP6P25-201ENST00000574491 261 ntBASIC5.55□□□□□ -1.52
CTNNA1P35221 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.55□□□□□ -1.52
CTNNA1P35221 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.55□□□□□ -1.52
CTNNA1P35221 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CTNNA1P35221 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CTNNA1P35221 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
CTNNA1P35221 AC119674.1-212ENST00000641155 993 ntBASIC5.55□□□□□ -1.52
CTNNA1P35221 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CTNNA1P35221 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.55□□□□□ -1.52
CTNNA1P35221 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CTNNA1P35221 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
CTNNA1P35221 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CTNNA1P35221 ZNF733P-202ENST00000444809 1573 ntBASIC5.55□□□□□ -1.52
CTNNA1P35221 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CTNNA1P35221 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CTNNA1P35221 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
CTNNA1P35221 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.54□□□□□ -1.52
CTNNA1P35221 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CTNNA1P35221 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.54□□□□□ -1.52
CTNNA1P35221 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
CTNNA1P35221 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CTNNA1P35221 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.54□□□□□ -1.52
CTNNA1P35221 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CTNNA1P35221 MIR133B-201ENST00000362210 119 ntBASIC5.54□□□□□ -1.52
CTNNA1P35221 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CTNNA1P35221 RNU6-532P-201ENST00000384318 107 ntBASIC5.54□□□□□ -1.52
CTNNA1P35221 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CTNNA1P35221 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.54□□□□□ -1.52
CTNNA1P35221 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.54□□□□□ -1.52
CTNNA1P35221 AC104333.2-201ENST00000422630 192 ntBASIC5.54□□□□□ -1.52
CTNNA1P35221 TNPO1P1-201ENST00000423641 1138 ntBASIC5.54□□□□□ -1.52
CTNNA1P35221 HSPE1P16-201ENST00000426640 348 ntBASIC5.54□□□□□ -1.52
CTNNA1P35221 NPM1P22-201ENST00000427761 952 ntBASIC5.54□□□□□ -1.52
CTNNA1P35221 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.54□□□□□ -1.52
CTNNA1P35221 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.54□□□□□ -1.52
CTNNA1P35221 HMGN1P2-201ENST00000445197 310 ntBASIC5.54□□□□□ -1.52
CTNNA1P35221 AC073909.1-201ENST00000447112 999 ntBASIC5.54□□□□□ -1.52
CTNNA1P35221 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.54□□□□□ -1.52
CTNNA1P35221 AP002345.1-201ENST00000456493 928 ntBASIC5.54□□□□□ -1.52
CTNNA1P35221 RN7SL515P-201ENST00000463999 297 ntBASIC5.54□□□□□ -1.52
CTNNA1P35221 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.54□□□□□ -1.52
CTNNA1P35221 METTL15P1-201ENST00000481421 1045 ntBASIC5.54□□□□□ -1.52
CTNNA1P35221 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.54□□□□□ -1.52
CTNNA1P35221 CDH12P2-201ENST00000504393 298 ntBASIC5.54□□□□□ -1.52
CTNNA1P35221 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.54□□□□□ -1.52
CTNNA1P35221 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.54□□□□□ -1.52
CTNNA1P35221 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 149.3 ms