Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.28□□□□□ -1.4
TM4SF1P30408 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TM4SF1P30408 AC004076.2-201ENST00000620532 3323 ntBASIC6.28□□□□□ -1.4
TM4SF1P30408 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TM4SF1P30408 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
TM4SF1P30408 AC116158.1-201ENST00000560231 2129 ntBASIC6.28□□□□□ -1.4
TM4SF1P30408 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
TM4SF1P30408 AL591135.1-201ENST00000401578 5914 ntBASIC6.27□□□□□ -1.4
TM4SF1P30408 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.4
TM4SF1P30408 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TM4SF1P30408 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
TM4SF1P30408 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TM4SF1P30408 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TM4SF1P30408 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.27□□□□□ -1.41
TM4SF1P30408 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TM4SF1P30408 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.27□□□□□ -1.41
TM4SF1P30408 AC022893.2-201ENST00000564832 3296 ntBASIC6.27□□□□□ -1.41
TM4SF1P30408 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TM4SF1P30408 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
TM4SF1P30408 RN7SKP185-201ENST00000362813 326 ntBASIC6.27□□□□□ -1.41
TM4SF1P30408 RNA5SP479-201ENST00000364858 117 ntBASIC6.27□□□□□ -1.41
TM4SF1P30408 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
TM4SF1P30408 SNORA2.3-201ENST00000383920 135 ntBASIC6.27□□□□□ -1.41
TM4SF1P30408 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
TM4SF1P30408 GLS-203ENST00000409215 632 ntTSL 4 BASIC6.27□□□□□ -1.41
TM4SF1P30408 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.27□□□□□ -1.41
TM4SF1P30408 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC6.27□□□□□ -1.41
TM4SF1P30408 SLC9B1P4-201ENST00000421957 1288 ntBASIC6.27□□□□□ -1.41
TM4SF1P30408 AC234779.1-201ENST00000425910 285 ntBASIC6.27□□□□□ -1.41
TM4SF1P30408 AL732292.1-201ENST00000426692 226 ntBASIC6.27□□□□□ -1.41
TM4SF1P30408 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
TM4SF1P30408 TXNP5-201ENST00000441043 315 ntBASIC6.27□□□□□ -1.41
TM4SF1P30408 EIF2S2P2-201ENST00000447161 982 ntBASIC6.27□□□□□ -1.41
TM4SF1P30408 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC6.27□□□□□ -1.41
TM4SF1P30408 RPL10P17-201ENST00000453852 316 ntBASIC6.27□□□□□ -1.41
TM4SF1P30408 OR11I1P-201ENST00000486033 954 ntBASIC6.27□□□□□ -1.41
TM4SF1P30408 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC6.27□□□□□ -1.41
TM4SF1P30408 ATG10-AS1-201ENST00000504846 648 ntBASIC6.27□□□□□ -1.41
TM4SF1P30408 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC6.27□□□□□ -1.41
TM4SF1P30408 AC134698.5-201ENST00000519444 336 ntBASIC6.27□□□□□ -1.41
TM4SF1P30408 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC6.27□□□□□ -1.41
TM4SF1P30408 OR5M2P-201ENST00000529003 936 ntBASIC6.27□□□□□ -1.41
TM4SF1P30408 MEG8-217ENST00000556637 924 ntTSL 5 BASIC6.27□□□□□ -1.41
TM4SF1P30408 AC009268.1-201ENST00000561352 1203 ntBASIC6.27□□□□□ -1.41
TM4SF1P30408 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC6.27□□□□□ -1.41
TM4SF1P30408 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC6.27□□□□□ -1.41
TM4SF1P30408 EIF1P5-201ENST00000585002 234 ntBASIC6.27□□□□□ -1.41
TM4SF1P30408 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC6.27□□□□□ -1.41
TM4SF1P30408 AL356608.1-201ENST00000610034 820 ntBASIC6.27□□□□□ -1.41
TM4SF1P30408 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.27□□□□□ -1.41
TM4SF1P30408 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC6.27□□□□□ -1.41
TM4SF1P30408 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC6.27□□□□□ -1.41
TM4SF1P30408 AC005261.6-201ENST00000623072 1387 ntBASIC6.27□□□□□ -1.41
TM4SF1P30408 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TM4SF1P30408 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
TM4SF1P30408 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TM4SF1P30408 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TM4SF1P30408 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.27□□□□□ -1.41
TM4SF1P30408 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TM4SF1P30408 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TM4SF1P30408 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TM4SF1P30408 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TM4SF1P30408 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
TM4SF1P30408 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
TM4SF1P30408 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TM4SF1P30408 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TM4SF1P30408 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
TM4SF1P30408 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC6.26□□□□□ -1.41
TM4SF1P30408 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TM4SF1P30408 AL136116.2-201ENST00000404020 785 ntBASIC6.26□□□□□ -1.41
TM4SF1P30408 RN7SKP106-201ENST00000410832 272 ntBASIC6.26□□□□□ -1.41
TM4SF1P30408 ELOCP19-201ENST00000411919 318 ntBASIC6.26□□□□□ -1.41
TM4SF1P30408 AL356968.2-201ENST00000412769 1257 ntBASIC6.26□□□□□ -1.41
TM4SF1P30408 RAB9AP4-201ENST00000415230 609 ntBASIC6.26□□□□□ -1.41
TM4SF1P30408 AL592293.2-201ENST00000422292 996 ntBASIC6.26□□□□□ -1.41
TM4SF1P30408 AJ239321.1-201ENST00000424255 564 ntBASIC6.26□□□□□ -1.41
TM4SF1P30408 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.26□□□□□ -1.41
TM4SF1P30408 OR2B7P-201ENST00000429302 934 ntBASIC6.26□□□□□ -1.41
TM4SF1P30408 AC009238.2-201ENST00000431026 355 ntBASIC6.26□□□□□ -1.41
TM4SF1P30408 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
TM4SF1P30408 SLC25A18P1-201ENST00000449385 454 ntBASIC6.26□□□□□ -1.41
TM4SF1P30408 NUTF2P7-201ENST00000453086 375 ntBASIC6.26□□□□□ -1.41
TM4SF1P30408 RNU6-362P-201ENST00000516736 90 ntBASIC6.26□□□□□ -1.41
TM4SF1P30408 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC6.26□□□□□ -1.41
TM4SF1P30408 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC6.26□□□□□ -1.41
TM4SF1P30408 AC012467.1-201ENST00000607740 256 ntBASIC6.26□□□□□ -1.41
TM4SF1P30408 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.26□□□□□ -1.41
TM4SF1P30408 CR381572.2-201ENST00000624852 397 ntBASIC6.26□□□□□ -1.41
TM4SF1P30408 MIR6830-201ENST00000636015 70 ntBASIC6.26□□□□□ -1.41
TM4SF1P30408 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TM4SF1P30408 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TM4SF1P30408 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.26□□□□□ -1.41
TM4SF1P30408 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TM4SF1P30408 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
TM4SF1P30408 ZNF652P1-201ENST00000442420 1309 ntBASIC6.25□□□□□ -1.41
TM4SF1P30408 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TM4SF1P30408 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TM4SF1P30408 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TM4SF1P30408 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
TM4SF1P30408 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms