Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NR4A1P22736 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.6□□□□□ -1.51
NR4A1P22736 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
NR4A1P22736 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.6□□□□□ -1.51
NR4A1P22736 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NR4A1P22736 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.6□□□□□ -1.51
NR4A1P22736 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NR4A1P22736 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NR4A1P22736 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.6□□□□□ -1.51
NR4A1P22736 AL161756.3-201ENST00000641216 2071 ntBASIC5.6□□□□□ -1.51
NR4A1P22736 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.6□□□□□ -1.51
NR4A1P22736 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.6□□□□□ -1.51
NR4A1P22736 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.6□□□□□ -1.51
NR4A1P22736 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
NR4A1P22736 AL355488.2-201ENST00000609909 2850 ntBASIC5.6□□□□□ -1.51
NR4A1P22736 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.6□□□□□ -1.51
NR4A1P22736 AC114774.1-201ENST00000507410 1770 ntBASIC5.6□□□□□ -1.51
NR4A1P22736 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NR4A1P22736 AC015689.2-201ENST00000528172 1738 ntBASIC5.6□□□□□ -1.51
NR4A1P22736 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.6□□□□□ -1.51
NR4A1P22736 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
NR4A1P22736 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
NR4A1P22736 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NR4A1P22736 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.59□□□□□ -1.51
NR4A1P22736 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
NR4A1P22736 AC011933.2-201ENST00000578539 2790 ntBASIC5.59□□□□□ -1.51
NR4A1P22736 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
NR4A1P22736 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.59□□□□□ -1.51
NR4A1P22736 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
NR4A1P22736 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NR4A1P22736 RN7SKP250-201ENST00000363924 321 ntBASIC5.59□□□□□ -1.51
NR4A1P22736 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.59□□□□□ -1.51
NR4A1P22736 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.59□□□□□ -1.51
NR4A1P22736 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.59□□□□□ -1.51
NR4A1P22736 SNORA5.1-201ENST00000384275 131 ntBASIC5.59□□□□□ -1.51
NR4A1P22736 PRELID1P1-201ENST00000403549 660 ntBASIC5.59□□□□□ -1.51
NR4A1P22736 MOB4-205ENST00000409916 829 ntTSL 3 BASIC5.59□□□□□ -1.51
NR4A1P22736 AC092638.1-201ENST00000411966 1275 ntBASIC5.59□□□□□ -1.51
NR4A1P22736 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.59□□□□□ -1.51
NR4A1P22736 RPS7P9-201ENST00000414704 586 ntBASIC5.59□□□□□ -1.51
NR4A1P22736 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.59□□□□□ -1.51
NR4A1P22736 AC011233.1-201ENST00000422812 283 ntBASIC5.59□□□□□ -1.51
NR4A1P22736 GTF2IP2-201ENST00000424290 697 ntBASIC5.59□□□□□ -1.51
NR4A1P22736 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.59□□□□□ -1.51
NR4A1P22736 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.59□□□□□ -1.51
NR4A1P22736 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.59□□□□□ -1.51
NR4A1P22736 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NR4A1P22736 KRT8P51-201ENST00000438938 274 ntBASIC5.59□□□□□ -1.51
NR4A1P22736 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.59□□□□□ -1.51
NR4A1P22736 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.59□□□□□ -1.51
NR4A1P22736 AC007383.1-201ENST00000445875 636 ntBASIC5.59□□□□□ -1.51
NR4A1P22736 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.59□□□□□ -1.51
NR4A1P22736 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.59□□□□□ -1.51
NR4A1P22736 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
NR4A1P22736 BZW1P2-201ENST00000473537 826 ntBASIC5.59□□□□□ -1.51
NR4A1P22736 SYPL1P1-201ENST00000473622 768 ntBASIC5.59□□□□□ -1.51
NR4A1P22736 OR9A1P-202ENST00000484361 945 ntBASIC5.59□□□□□ -1.51
NR4A1P22736 RPL29P23-201ENST00000486188 442 ntBASIC5.59□□□□□ -1.51
NR4A1P22736 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC5.59□□□□□ -1.51
NR4A1P22736 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.59□□□□□ -1.51
NR4A1P22736 OR51A1P-201ENST00000511110 946 ntBASIC5.59□□□□□ -1.51
NR4A1P22736 AC106800.3-201ENST00000511389 308 ntBASIC5.59□□□□□ -1.51
NR4A1P22736 NDUFB4P12-201ENST00000513465 390 ntBASIC5.59□□□□□ -1.51
NR4A1P22736 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.59□□□□□ -1.51
NR4A1P22736 NRON-201ENST00000517270 370 ntBASIC5.59□□□□□ -1.51
NR4A1P22736 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC5.59□□□□□ -1.51
NR4A1P22736 PTK2-220ENST00000520151 573 ntTSL 4 BASIC5.59□□□□□ -1.51
NR4A1P22736 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NR4A1P22736 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.59□□□□□ -1.51
NR4A1P22736 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.59□□□□□ -1.51
NR4A1P22736 CBX3P7-201ENST00000532876 502 ntBASIC5.59□□□□□ -1.51
NR4A1P22736 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.59□□□□□ -1.51
NR4A1P22736 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.59□□□□□ -1.51
NR4A1P22736 AC087465.1-201ENST00000560574 245 ntBASIC5.59□□□□□ -1.51
NR4A1P22736 AGGF1P8-201ENST00000562979 1000 ntBASIC5.59□□□□□ -1.51
NR4A1P22736 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.59□□□□□ -1.51
NR4A1P22736 AC090616.1-201ENST00000583895 447 ntBASIC5.59□□□□□ -1.51
NR4A1P22736 RN7SL622P-201ENST00000585292 275 ntBASIC5.59□□□□□ -1.51
NR4A1P22736 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.59□□□□□ -1.51
NR4A1P22736 NPIPB1P-202ENST00000588786 828 ntBASIC5.59□□□□□ -1.51
NR4A1P22736 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.59□□□□□ -1.51
NR4A1P22736 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.59□□□□□ -1.51
NR4A1P22736 AC011500.1-201ENST00000601963 469 ntBASIC5.59□□□□□ -1.51
NR4A1P22736 AL163642.2-201ENST00000604722 1019 ntBASIC5.59□□□□□ -1.51
NR4A1P22736 AP003392.5-201ENST00000607857 415 ntBASIC5.59□□□□□ -1.51
NR4A1P22736 AC108673.3-201ENST00000609183 335 ntBASIC5.59□□□□□ -1.51
NR4A1P22736 AP000254.1-201ENST00000609934 520 ntBASIC5.59□□□□□ -1.51
NR4A1P22736 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
NR4A1P22736 AC122133.1-201ENST00000613964 233 ntBASIC5.59□□□□□ -1.51
NR4A1P22736 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.59□□□□□ -1.51
NR4A1P22736 AP000550.3-201ENST00000637734 379 ntBASIC5.59□□□□□ -1.51
NR4A1P22736 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.59□□□□□ -1.51
NR4A1P22736 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NR4A1P22736 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NR4A1P22736 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
NR4A1P22736 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NR4A1P22736 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
NR4A1P22736 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NR4A1P22736 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
NR4A1P22736 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms