Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CAPN3P20807 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CAPN3P20807 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CAPN3P20807 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CAPN3P20807 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CAPN3P20807 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
CAPN3P20807 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.49□□□□□ -1.53
CAPN3P20807 AP001029.2-203ENST00000589795 4910 ntBASIC5.49□□□□□ -1.53
CAPN3P20807 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.49□□□□□ -1.53
CAPN3P20807 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CAPN3P20807 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CAPN3P20807 AC008627.1-201ENST00000517511 1704 ntBASIC5.49□□□□□ -1.53
CAPN3P20807 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
CAPN3P20807 RNA5SP326-201ENST00000363209 110 ntBASIC5.49□□□□□ -1.53
CAPN3P20807 RNU6-792P-201ENST00000363490 107 ntBASIC5.49□□□□□ -1.53
CAPN3P20807 RN7SKP292-201ENST00000365522 317 ntBASIC5.49□□□□□ -1.53
CAPN3P20807 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.49□□□□□ -1.53
CAPN3P20807 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CAPN3P20807 AL391361.1-201ENST00000405580 489 ntBASIC5.49□□□□□ -1.53
CAPN3P20807 RPS3AP2-201ENST00000407190 754 ntBASIC5.49□□□□□ -1.53
CAPN3P20807 AC096921.1-201ENST00000411661 375 ntBASIC5.49□□□□□ -1.53
CAPN3P20807 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.49□□□□□ -1.53
CAPN3P20807 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC5.49□□□□□ -1.53
CAPN3P20807 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.49□□□□□ -1.53
CAPN3P20807 AL035660.1-201ENST00000422041 222 ntBASIC5.49□□□□□ -1.53
CAPN3P20807 PNRC2P1-201ENST00000423940 420 ntBASIC5.49□□□□□ -1.53
CAPN3P20807 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.49□□□□□ -1.53
CAPN3P20807 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.49□□□□□ -1.53
CAPN3P20807 RPS27P18-201ENST00000431701 247 ntBASIC5.49□□□□□ -1.53
CAPN3P20807 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.49□□□□□ -1.53
CAPN3P20807 FTH1P16-201ENST00000435241 552 ntBASIC5.49□□□□□ -1.53
CAPN3P20807 RPL12P18-201ENST00000437175 325 ntBASIC5.49□□□□□ -1.53
CAPN3P20807 AL353662.1-201ENST00000439099 327 ntBASIC5.49□□□□□ -1.53
CAPN3P20807 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.49□□□□□ -1.53
CAPN3P20807 RNFT1P2-201ENST00000443064 757 ntBASIC5.49□□□□□ -1.53
CAPN3P20807 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CAPN3P20807 OR7E116P-201ENST00000448529 957 ntBASIC5.49□□□□□ -1.53
CAPN3P20807 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CAPN3P20807 DUTP1-201ENST00000493631 470 ntBASIC5.49□□□□□ -1.53
CAPN3P20807 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.49□□□□□ -1.53
CAPN3P20807 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC5.49□□□□□ -1.53
CAPN3P20807 RNA5SP340-201ENST00000517132 107 ntBASIC5.49□□□□□ -1.53
CAPN3P20807 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.49□□□□□ -1.53
CAPN3P20807 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.49□□□□□ -1.53
CAPN3P20807 BUD31P1-201ENST00000521828 359 ntBASIC5.49□□□□□ -1.53
CAPN3P20807 SMARCE1P4-201ENST00000523647 241 ntBASIC5.49□□□□□ -1.53
CAPN3P20807 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.49□□□□□ -1.53
CAPN3P20807 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CAPN3P20807 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.49□□□□□ -1.53
CAPN3P20807 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CAPN3P20807 OR4R2P-201ENST00000530815 597 ntBASIC5.49□□□□□ -1.53
CAPN3P20807 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CAPN3P20807 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.49□□□□□ -1.53
CAPN3P20807 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.49□□□□□ -1.53
CAPN3P20807 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
CAPN3P20807 MIR4700-201ENST00000578311 74 ntBASIC5.49□□□□□ -1.53
CAPN3P20807 AC010200.2-201ENST00000605098 235 ntBASIC5.49□□□□□ -1.53
CAPN3P20807 AL139099.4-201ENST00000614802 114 ntBASIC5.49□□□□□ -1.53
CAPN3P20807 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.49□□□□□ -1.53
CAPN3P20807 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.49□□□□□ -1.53
CAPN3P20807 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.49□□□□□ -1.53
CAPN3P20807 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
CAPN3P20807 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CAPN3P20807 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.48□□□□□ -1.53
CAPN3P20807 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CAPN3P20807 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CAPN3P20807 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.48□□□□□ -1.53
CAPN3P20807 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
CAPN3P20807 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CAPN3P20807 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CAPN3P20807 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CAPN3P20807 MIR16-2-201ENST00000362117 81 ntBASIC5.48□□□□□ -1.53
CAPN3P20807 SNORA5.1-201ENST00000384275 131 ntBASIC5.48□□□□□ -1.53
CAPN3P20807 MIR130A-201ENST00000385274 89 ntBASIC5.48□□□□□ -1.53
CAPN3P20807 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CAPN3P20807 VTA1P1-201ENST00000414044 866 ntBASIC5.48□□□□□ -1.53
CAPN3P20807 AL133482.1-201ENST00000415988 498 ntBASIC5.48□□□□□ -1.53
CAPN3P20807 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.48□□□□□ -1.53
CAPN3P20807 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CAPN3P20807 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.48□□□□□ -1.53
CAPN3P20807 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.48□□□□□ -1.53
CAPN3P20807 RPL7P55-201ENST00000450522 746 ntBASIC5.48□□□□□ -1.53
CAPN3P20807 RPS26P39-201ENST00000469206 341 ntBASIC5.48□□□□□ -1.53
CAPN3P20807 RN7SKP238-201ENST00000516483 249 ntBASIC5.48□□□□□ -1.53
CAPN3P20807 RNU6-347P-201ENST00000516658 105 ntBASIC5.48□□□□□ -1.53
CAPN3P20807 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.48□□□□□ -1.53
CAPN3P20807 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.48□□□□□ -1.53
CAPN3P20807 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.48□□□□□ -1.53
CAPN3P20807 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.48□□□□□ -1.53
CAPN3P20807 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.48□□□□□ -1.53
CAPN3P20807 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.48□□□□□ -1.53
CAPN3P20807 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.48□□□□□ -1.53
CAPN3P20807 AC092121.1-201ENST00000569452 202 ntBASIC5.48□□□□□ -1.53
CAPN3P20807 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CAPN3P20807 SNORD95-201ENST00000579879 68 ntBASIC5.48□□□□□ -1.53
CAPN3P20807 AP005119.1-201ENST00000580956 292 ntBASIC5.48□□□□□ -1.53
CAPN3P20807 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.48□□□□□ -1.53
CAPN3P20807 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CAPN3P20807 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC5.48□□□□□ -1.53
CAPN3P20807 AC002069.2-201ENST00000603580 883 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms