Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC109462.1-201ENST00000491087 368 ntBASIC5.12□□□□□ -1.59
XRCC1P18887 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.12□□□□□ -1.59
XRCC1P18887 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.12□□□□□ -1.59
XRCC1P18887 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.12□□□□□ -1.59
XRCC1P18887 MIR3691-201ENST00000578066 90 ntBASIC5.12□□□□□ -1.59
XRCC1P18887 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.12□□□□□ -1.59
XRCC1P18887 AC009597.2-201ENST00000604659 592 ntBASIC5.12□□□□□ -1.59
XRCC1P18887 NF1P10-201ENST00000613227 742 ntBASIC5.12□□□□□ -1.59
XRCC1P18887 AL122125.1-201ENST00000616999 600 ntBASIC5.12□□□□□ -1.59
XRCC1P18887 AC068870.2-201ENST00000620635 389 ntBASIC5.12□□□□□ -1.59
XRCC1P18887 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
XRCC1P18887 AC135068.12-201ENST00000637370 931 ntBASIC5.12□□□□□ -1.59
XRCC1P18887 LINC01739-205ENST00000641890 573 ntBASIC5.12□□□□□ -1.59
XRCC1P18887 HSPA8P18-201ENST00000439846 1928 ntBASIC5.12□□□□□ -1.59
XRCC1P18887 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.12□□□□□ -1.59
XRCC1P18887 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.12□□□□□ -1.59
XRCC1P18887 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
XRCC1P18887 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.12□□□□□ -1.59
XRCC1P18887 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
XRCC1P18887 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
XRCC1P18887 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
XRCC1P18887 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
XRCC1P18887 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.12□□□□□ -1.59
XRCC1P18887 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
XRCC1P18887 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
XRCC1P18887 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.11□□□□□ -1.59
XRCC1P18887 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
XRCC1P18887 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
XRCC1P18887 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
XRCC1P18887 CUL4AP1-201ENST00000514750 1863 ntBASIC5.11□□□□□ -1.59
XRCC1P18887 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
XRCC1P18887 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
XRCC1P18887 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
XRCC1P18887 MTHFD2P5-201ENST00000320415 844 ntBASIC5.11□□□□□ -1.59
XRCC1P18887 SNORA58B-201ENST00000364259 136 ntBASIC5.11□□□□□ -1.59
XRCC1P18887 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.11□□□□□ -1.59
XRCC1P18887 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
XRCC1P18887 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
XRCC1P18887 MIR1182-201ENST00000408363 97 ntBASIC5.11□□□□□ -1.59
XRCC1P18887 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
XRCC1P18887 RN7SKP126-201ENST00000411143 300 ntBASIC5.11□□□□□ -1.59
XRCC1P18887 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.11□□□□□ -1.59
XRCC1P18887 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
XRCC1P18887 AL161722.2-201ENST00000434731 981 ntBASIC5.11□□□□□ -1.59
XRCC1P18887 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.11□□□□□ -1.59
XRCC1P18887 CYCSP24-201ENST00000445119 316 ntBASIC5.11□□□□□ -1.59
XRCC1P18887 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.11□□□□□ -1.59
XRCC1P18887 CBX1P5-201ENST00000475330 559 ntBASIC5.11□□□□□ -1.59
XRCC1P18887 AC113398.2-201ENST00000507630 558 ntBASIC5.11□□□□□ -1.59
XRCC1P18887 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
XRCC1P18887 SNORD116-30-201ENST00000516468 85 ntBASIC5.11□□□□□ -1.59
XRCC1P18887 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC5.11□□□□□ -1.59
XRCC1P18887 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.11□□□□□ -1.59
XRCC1P18887 AC087763.1-201ENST00000603391 286 ntBASIC5.11□□□□□ -1.59
XRCC1P18887 AP002799.1-201ENST00000623552 423 ntBASIC5.11□□□□□ -1.59
XRCC1P18887 CASC19-222ENST00000641321 1173 ntBASIC5.11□□□□□ -1.59
XRCC1P18887 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.11□□□□□ -1.59
XRCC1P18887 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.11□□□□□ -1.59
XRCC1P18887 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
XRCC1P18887 MTCO1P22-201ENST00000604619 1360 ntBASIC5.11□□□□□ -1.59
XRCC1P18887 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
XRCC1P18887 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.11□□□□□ -1.59
XRCC1P18887 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
XRCC1P18887 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.11□□□□□ -1.59
XRCC1P18887 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.1□□□□□ -1.59
XRCC1P18887 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
XRCC1P18887 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.1□□□□□ -1.59
XRCC1P18887 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
XRCC1P18887 RNA5SP90-201ENST00000364801 99 ntBASIC5.1□□□□□ -1.59
XRCC1P18887 RN7SKP153-201ENST00000365026 316 ntBASIC5.1□□□□□ -1.59
XRCC1P18887 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
XRCC1P18887 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
XRCC1P18887 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
XRCC1P18887 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
XRCC1P18887 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.1□□□□□ -1.59
XRCC1P18887 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.1□□□□□ -1.59
XRCC1P18887 AC007394.1-201ENST00000421941 531 ntBASIC5.1□□□□□ -1.59
XRCC1P18887 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.1□□□□□ -1.59
XRCC1P18887 GTF3AP5-201ENST00000442645 697 ntBASIC5.1□□□□□ -1.59
XRCC1P18887 AC073850.1-201ENST00000449243 255 ntBASIC5.1□□□□□ -1.59
XRCC1P18887 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.1□□□□□ -1.59
XRCC1P18887 RN7SL610P-201ENST00000463845 291 ntBASIC5.1□□□□□ -1.59
XRCC1P18887 RPL7AP6-201ENST00000477943 801 ntBASIC5.1□□□□□ -1.59
XRCC1P18887 BX284632.1-201ENST00000478218 541 ntBASIC5.1□□□□□ -1.59
XRCC1P18887 OR11I1P-201ENST00000486033 954 ntBASIC5.1□□□□□ -1.59
XRCC1P18887 RN7SL814P-201ENST00000487715 300 ntBASIC5.1□□□□□ -1.59
XRCC1P18887 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.1□□□□□ -1.59
XRCC1P18887 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.1□□□□□ -1.59
XRCC1P18887 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.1□□□□□ -1.59
XRCC1P18887 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.1□□□□□ -1.59
XRCC1P18887 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.1□□□□□ -1.59
XRCC1P18887 AC006427.1-201ENST00000514359 712 ntBASIC5.1□□□□□ -1.59
XRCC1P18887 RN7SKP66-201ENST00000516681 231 ntBASIC5.1□□□□□ -1.59
XRCC1P18887 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC5.1□□□□□ -1.59
XRCC1P18887 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.1□□□□□ -1.59
XRCC1P18887 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.1□□□□□ -1.59
XRCC1P18887 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
XRCC1P18887 RN7SL708P-201ENST00000580952 299 ntBASIC5.1□□□□□ -1.59
XRCC1P18887 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
XRCC1P18887 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms