Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.39□□□□□ -1.71
CTLA4P16410 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.39□□□□□ -1.71
CTLA4P16410 TAS2R6P-201ENST00000605022 826 ntBASIC4.39□□□□□ -1.71
CTLA4P16410 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC4.39□□□□□ -1.71
CTLA4P16410 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.39□□□□□ -1.71
CTLA4P16410 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.39□□□□□ -1.71
CTLA4P16410 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.39□□□□□ -1.71
CTLA4P16410 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
CTLA4P16410 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CTLA4P16410 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CTLA4P16410 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.39□□□□□ -1.71
CTLA4P16410 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CTLA4P16410 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CTLA4P16410 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.39□□□□□ -1.71
CTLA4P16410 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.38□□□□□ -1.71
CTLA4P16410 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CTLA4P16410 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
CTLA4P16410 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CTLA4P16410 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CTLA4P16410 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CTLA4P16410 MTCO1P11-201ENST00000429111 1528 ntBASIC4.38□□□□□ -1.71
CTLA4P16410 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
CTLA4P16410 RNA5SP455-201ENST00000365190 119 ntBASIC4.38□□□□□ -1.71
CTLA4P16410 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CTLA4P16410 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CTLA4P16410 AL136116.2-201ENST00000404020 785 ntBASIC4.38□□□□□ -1.71
CTLA4P16410 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.38□□□□□ -1.71
CTLA4P16410 TMBIM7P-201ENST00000418074 855 ntBASIC4.38□□□□□ -1.71
CTLA4P16410 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC4.38□□□□□ -1.71
CTLA4P16410 AL136455.1-201ENST00000441083 1240 ntBASIC4.38□□□□□ -1.71
CTLA4P16410 SEPT7P3-201ENST00000455017 621 ntBASIC4.38□□□□□ -1.71
CTLA4P16410 RN7SL517P-201ENST00000462240 305 ntBASIC4.38□□□□□ -1.71
CTLA4P16410 AC090114.3-201ENST00000479267 829 ntBASIC4.38□□□□□ -1.71
CTLA4P16410 AC090686.1-201ENST00000481577 749 ntBASIC4.38□□□□□ -1.71
CTLA4P16410 OR2A3P-201ENST00000493774 953 ntBASIC4.38□□□□□ -1.71
CTLA4P16410 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.38□□□□□ -1.71
CTLA4P16410 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.38□□□□□ -1.71
CTLA4P16410 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.38□□□□□ -1.71
CTLA4P16410 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.38□□□□□ -1.71
CTLA4P16410 MIR6729-201ENST00000618194 65 ntBASIC4.38□□□□□ -1.71
CTLA4P16410 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC4.38□□□□□ -1.71
CTLA4P16410 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CTLA4P16410 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.38□□□□□ -1.71
CTLA4P16410 THAP12P4-201ENST00000528321 2266 ntBASIC4.38□□□□□ -1.71
CTLA4P16410 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CTLA4P16410 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CTLA4P16410 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.38□□□□□ -1.71
CTLA4P16410 STX3-208ENST00000641815 3236 ntBASIC4.38□□□□□ -1.71
CTLA4P16410 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CTLA4P16410 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.38□□□□□ -1.71
CTLA4P16410 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CTLA4P16410 AC007996.1-201ENST00000620414 2821 ntBASIC4.37□□□□□ -1.71
CTLA4P16410 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.37□□□□□ -1.71
CTLA4P16410 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CTLA4P16410 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.37□□□□□ -1.71
CTLA4P16410 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.37□□□□□ -1.71
CTLA4P16410 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.37□□□□□ -1.71
CTLA4P16410 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CTLA4P16410 RPL23P2-201ENST00000320371 421 ntBASIC4.37□□□□□ -1.71
CTLA4P16410 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.37□□□□□ -1.71
CTLA4P16410 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CTLA4P16410 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CTLA4P16410 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.37□□□□□ -1.71
CTLA4P16410 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.37□□□□□ -1.71
CTLA4P16410 AC005033.1-201ENST00000428904 813 ntBASIC4.37□□□□□ -1.71
CTLA4P16410 AC092162.1-201ENST00000432828 434 ntBASIC4.37□□□□□ -1.71
CTLA4P16410 AL163193.1-201ENST00000444895 788 ntBASIC4.37□□□□□ -1.71
CTLA4P16410 RNU7-157P-201ENST00000459600 66 ntBASIC4.37□□□□□ -1.71
CTLA4P16410 RPS26P39-201ENST00000469206 341 ntBASIC4.37□□□□□ -1.71
CTLA4P16410 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.37□□□□□ -1.71
CTLA4P16410 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CTLA4P16410 RN7SL244P-201ENST00000493405 297 ntBASIC4.37□□□□□ -1.71
CTLA4P16410 AC023424.1-201ENST00000496058 459 ntBASIC4.37□□□□□ -1.71
CTLA4P16410 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.37□□□□□ -1.71
CTLA4P16410 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.37□□□□□ -1.71
CTLA4P16410 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CTLA4P16410 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC4.37□□□□□ -1.71
CTLA4P16410 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.37□□□□□ -1.71
CTLA4P16410 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.37□□□□□ -1.71
CTLA4P16410 AC092490.3-201ENST00000545370 572 ntBASIC4.37□□□□□ -1.71
CTLA4P16410 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CTLA4P16410 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.37□□□□□ -1.71
CTLA4P16410 MIR4472-2-201ENST00000582069 67 ntBASIC4.37□□□□□ -1.71
CTLA4P16410 MIR4691-201ENST00000583764 85 ntBASIC4.37□□□□□ -1.71
CTLA4P16410 AC087783.2-201ENST00000605070 562 ntBASIC4.37□□□□□ -1.71
CTLA4P16410 OR51C1P-201ENST00000608504 942 ntBASIC4.37□□□□□ -1.71
CTLA4P16410 MIR6862-1-201ENST00000613016 70 ntBASIC4.37□□□□□ -1.71
CTLA4P16410 MIR6862-2-201ENST00000614755 70 ntBASIC4.37□□□□□ -1.71
CTLA4P16410 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.37□□□□□ -1.71
CTLA4P16410 AC019206.1-201ENST00000621938 425 ntBASIC4.37□□□□□ -1.71
CTLA4P16410 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CTLA4P16410 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
CTLA4P16410 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.37□□□□□ -1.71
CTLA4P16410 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CTLA4P16410 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.37□□□□□ -1.71
CTLA4P16410 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CTLA4P16410 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CTLA4P16410 AC006484.1-201ENST00000435086 1884 ntBASIC4.37□□□□□ -1.71
CTLA4P16410 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CTLA4P16410 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms