Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC6.74□□□□□ -1.33
PDGFAP04085 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PDGFAP04085 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PDGFAP04085 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PDGFAP04085 THAP12P7-201ENST00000520248 2290 ntBASIC6.74□□□□□ -1.33
PDGFAP04085 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
PDGFAP04085 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC6.74□□□□□ -1.33
PDGFAP04085 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
PDGFAP04085 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
PDGFAP04085 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
PDGFAP04085 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
PDGFAP04085 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PDGFAP04085 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PDGFAP04085 RNU6-317P-201ENST00000384031 107 ntBASIC6.74□□□□□ -1.33
PDGFAP04085 SNORA70.8-201ENST00000384231 136 ntBASIC6.74□□□□□ -1.33
PDGFAP04085 DNAJA1P4-201ENST00000406473 1166 ntBASIC6.74□□□□□ -1.33
PDGFAP04085 RNU4-55P-201ENST00000410731 137 ntBASIC6.74□□□□□ -1.33
PDGFAP04085 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC6.74□□□□□ -1.33
PDGFAP04085 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC6.74□□□□□ -1.33
PDGFAP04085 AC244505.2-201ENST00000435089 759 ntBASIC6.74□□□□□ -1.33
PDGFAP04085 SKP1P1-201ENST00000438081 489 ntBASIC6.74□□□□□ -1.33
PDGFAP04085 FABP5P2-201ENST00000439042 408 ntBASIC6.74□□□□□ -1.33
PDGFAP04085 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC6.74□□□□□ -1.33
PDGFAP04085 AL590365.1-201ENST00000450788 243 ntBASIC6.74□□□□□ -1.33
PDGFAP04085 VNN3-210ENST00000450865 596 ntTSL 4 BASIC6.74□□□□□ -1.33
PDGFAP04085 RPSAP48-201ENST00000466509 889 ntBASIC6.74□□□□□ -1.33
PDGFAP04085 ACTR3P3-201ENST00000480448 893 ntBASIC6.74□□□□□ -1.33
PDGFAP04085 RN7SL868P-201ENST00000485915 303 ntBASIC6.74□□□□□ -1.33
PDGFAP04085 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC6.74□□□□□ -1.33
PDGFAP04085 NPY6R-201ENST00000503807 1112 ntBASIC6.74□□□□□ -1.33
PDGFAP04085 AC108120.1-201ENST00000506543 991 ntBASIC6.74□□□□□ -1.33
PDGFAP04085 MTND3P22-201ENST00000510932 243 ntBASIC6.74□□□□□ -1.33
PDGFAP04085 SAP18P1-201ENST00000512058 390 ntBASIC6.74□□□□□ -1.33
PDGFAP04085 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PDGFAP04085 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC6.74□□□□□ -1.33
PDGFAP04085 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC6.74□□□□□ -1.33
PDGFAP04085 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.74□□□□□ -1.33
PDGFAP04085 AL135978.1-201ENST00000553618 1266 ntBASIC6.74□□□□□ -1.33
PDGFAP04085 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC6.74□□□□□ -1.33
PDGFAP04085 AL157687.1-201ENST00000554853 619 ntBASIC6.74□□□□□ -1.33
PDGFAP04085 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC6.74□□□□□ -1.33
PDGFAP04085 NDUFA3P4-201ENST00000560814 250 ntBASIC6.74□□□□□ -1.33
PDGFAP04085 ULK4P2-202ENST00000564187 492 ntBASIC6.74□□□□□ -1.33
PDGFAP04085 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC6.74□□□□□ -1.33
PDGFAP04085 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC6.74□□□□□ -1.33
PDGFAP04085 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC6.74□□□□□ -1.33
PDGFAP04085 AC009977.1-201ENST00000586015 570 ntBASIC6.74□□□□□ -1.33
PDGFAP04085 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC6.74□□□□□ -1.33
PDGFAP04085 AL080312.2-201ENST00000613001 630 ntBASIC6.74□□□□□ -1.33
PDGFAP04085 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC6.74□□□□□ -1.33
PDGFAP04085 AC116563.2-201ENST00000624751 535 ntBASIC6.74□□□□□ -1.33
PDGFAP04085 AC005618.4-201ENST00000625053 554 ntBASIC6.74□□□□□ -1.33
PDGFAP04085 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC6.74□□□□□ -1.33
PDGFAP04085 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
PDGFAP04085 AC079178.2-201ENST00000439323 1624 ntBASIC6.74□□□□□ -1.33
PDGFAP04085 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
PDGFAP04085 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PDGFAP04085 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PDGFAP04085 ANKRD20A10P-201ENST00000457591 1515 ntBASIC6.74□□□□□ -1.33
PDGFAP04085 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC6.74□□□□□ -1.33
PDGFAP04085 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PDGFAP04085 MAPK10-272ENST00000641110 2724 ntAPPRIS P2 BASIC6.74□□□□□ -1.33
PDGFAP04085 AC007012.2-201ENST00000623206 1676 ntBASIC6.74□□□□□ -1.33
PDGFAP04085 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PDGFAP04085 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC6.74□□□□□ -1.33
PDGFAP04085 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC6.73□□□□□ -1.33
PDGFAP04085 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC6.73□□□□□ -1.33
PDGFAP04085 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC6.73□□□□□ -1.33
PDGFAP04085 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PDGFAP04085 RMST-202ENST00000541282 2099 ntTSL 2 BASIC6.73□□□□□ -1.33
PDGFAP04085 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
PDGFAP04085 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.73□□□□□ -1.33
PDGFAP04085 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PDGFAP04085 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PDGFAP04085 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC6.73□□□□□ -1.33
PDGFAP04085 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PDGFAP04085 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PDGFAP04085 AL161912.4-201ENST00000623889 2468 ntBASIC6.73□□□□□ -1.33
PDGFAP04085 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
PDGFAP04085 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
PDGFAP04085 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PDGFAP04085 AL353795.1-201ENST00000439134 1775 ntBASIC6.73□□□□□ -1.33
PDGFAP04085 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PDGFAP04085 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PDGFAP04085 Y_RNA.295-201ENST00000364918 102 ntBASIC6.73□□□□□ -1.33
PDGFAP04085 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC6.73□□□□□ -1.33
PDGFAP04085 RNU6-1151P-201ENST00000384684 107 ntBASIC6.73□□□□□ -1.33
PDGFAP04085 MT-TD-201ENST00000387419 68 ntBASIC6.73□□□□□ -1.33
PDGFAP04085 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
PDGFAP04085 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
PDGFAP04085 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
PDGFAP04085 RPS3AP36-201ENST00000398190 775 ntBASIC6.73□□□□□ -1.33
PDGFAP04085 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.73□□□□□ -1.33
PDGFAP04085 RN7SKP207-201ENST00000411204 303 ntBASIC6.73□□□□□ -1.33
PDGFAP04085 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC6.73□□□□□ -1.33
PDGFAP04085 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.73□□□□□ -1.33
PDGFAP04085 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC6.73□□□□□ -1.33
PDGFAP04085 AC010145.1-201ENST00000422415 516 ntTSL 5 BASIC6.73□□□□□ -1.33
PDGFAP04085 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PDGFAP04085 BX890604.2-201ENST00000427883 474 ntBASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms