Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.3□□□□□ -1.56
SMIM28A0A1B0GU29 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SMIM28A0A1B0GU29 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SMIM28A0A1B0GU29 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SMIM28A0A1B0GU29 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.3□□□□□ -1.56
SMIM28A0A1B0GU29 CYB5AP4-201ENST00000396692 399 ntBASIC5.3□□□□□ -1.56
SMIM28A0A1B0GU29 AC013442.1-201ENST00000397347 228 ntBASIC5.3□□□□□ -1.56
SMIM28A0A1B0GU29 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SMIM28A0A1B0GU29 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.3□□□□□ -1.56
SMIM28A0A1B0GU29 TBCAP2-201ENST00000416175 326 ntBASIC5.3□□□□□ -1.56
SMIM28A0A1B0GU29 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SMIM28A0A1B0GU29 RPL5P2-201ENST00000429598 854 ntBASIC5.3□□□□□ -1.56
SMIM28A0A1B0GU29 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.3□□□□□ -1.56
SMIM28A0A1B0GU29 AC009963.4-201ENST00000448535 339 ntBASIC5.3□□□□□ -1.56
SMIM28A0A1B0GU29 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.3□□□□□ -1.56
SMIM28A0A1B0GU29 AC234781.3-201ENST00000452540 973 ntBASIC5.3□□□□□ -1.56
SMIM28A0A1B0GU29 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.3□□□□□ -1.56
SMIM28A0A1B0GU29 RPS29P22-201ENST00000472363 168 ntBASIC5.3□□□□□ -1.56
SMIM28A0A1B0GU29 AC116562.1-201ENST00000485355 781 ntBASIC5.3□□□□□ -1.56
SMIM28A0A1B0GU29 COX6B1P2-201ENST00000489624 230 ntBASIC5.3□□□□□ -1.56
SMIM28A0A1B0GU29 ENPP7P11-201ENST00000505915 627 ntBASIC5.3□□□□□ -1.56
SMIM28A0A1B0GU29 AC021733.2-201ENST00000518830 497 ntBASIC5.3□□□□□ -1.56
SMIM28A0A1B0GU29 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.3□□□□□ -1.56
SMIM28A0A1B0GU29 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.3□□□□□ -1.56
SMIM28A0A1B0GU29 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.3□□□□□ -1.56
SMIM28A0A1B0GU29 AC008147.3-201ENST00000548666 354 ntBASIC5.3□□□□□ -1.56
SMIM28A0A1B0GU29 AC116553.2-201ENST00000564203 463 ntBASIC5.3□□□□□ -1.56
SMIM28A0A1B0GU29 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC5.3□□□□□ -1.56
SMIM28A0A1B0GU29 AC104785.1-201ENST00000603220 588 ntBASIC5.3□□□□□ -1.56
SMIM28A0A1B0GU29 AC005229.3-201ENST00000603438 323 ntBASIC5.3□□□□□ -1.56
SMIM28A0A1B0GU29 AC087283.1-201ENST00000604029 1074 ntBASIC5.3□□□□□ -1.56
SMIM28A0A1B0GU29 AC007497.1-201ENST00000610421 561 ntBASIC5.3□□□□□ -1.56
SMIM28A0A1B0GU29 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.3□□□□□ -1.56
SMIM28A0A1B0GU29 CR381572.2-201ENST00000624852 397 ntBASIC5.3□□□□□ -1.56
SMIM28A0A1B0GU29 AC012618.3-205ENST00000637896 1496 ntBASIC5.3□□□□□ -1.56
SMIM28A0A1B0GU29 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SMIM28A0A1B0GU29 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
SMIM28A0A1B0GU29 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.3□□□□□ -1.56
SMIM28A0A1B0GU29 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
SMIM28A0A1B0GU29 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
SMIM28A0A1B0GU29 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
SMIM28A0A1B0GU29 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
SMIM28A0A1B0GU29 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SMIM28A0A1B0GU29 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SMIM28A0A1B0GU29 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.29□□□□□ -1.56
SMIM28A0A1B0GU29 SNORA73.1-201ENST00000363107 205 ntBASIC5.29□□□□□ -1.56
SMIM28A0A1B0GU29 RPL21P67-201ENST00000402896 478 ntBASIC5.29□□□□□ -1.56
SMIM28A0A1B0GU29 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SMIM28A0A1B0GU29 QRSL1P2-201ENST00000418582 964 ntBASIC5.29□□□□□ -1.56
SMIM28A0A1B0GU29 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.29□□□□□ -1.56
SMIM28A0A1B0GU29 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.29□□□□□ -1.56
SMIM28A0A1B0GU29 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SMIM28A0A1B0GU29 AC000111.2-201ENST00000448200 210 ntBASIC5.29□□□□□ -1.56
SMIM28A0A1B0GU29 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SMIM28A0A1B0GU29 AC128716.1-201ENST00000475129 166 ntBASIC5.29□□□□□ -1.56
SMIM28A0A1B0GU29 AL049874.2-201ENST00000492636 288 ntBASIC5.29□□□□□ -1.56
SMIM28A0A1B0GU29 OR2A3P-201ENST00000493774 953 ntBASIC5.29□□□□□ -1.56
SMIM28A0A1B0GU29 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.29□□□□□ -1.56
SMIM28A0A1B0GU29 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SMIM28A0A1B0GU29 AC091042.1-201ENST00000579213 173 ntBASIC5.29□□□□□ -1.56
SMIM28A0A1B0GU29 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.29□□□□□ -1.56
SMIM28A0A1B0GU29 AC104687.2-201ENST00000604442 342 ntBASIC5.29□□□□□ -1.56
SMIM28A0A1B0GU29 AC010424.2-201ENST00000607594 443 ntBASIC5.29□□□□□ -1.56
SMIM28A0A1B0GU29 AC243960.7-201ENST00000623532 707 ntBASIC5.29□□□□□ -1.56
SMIM28A0A1B0GU29 IPO5-229ENST00000631030 192 ntTSL 5 BASIC5.29□□□□□ -1.56
SMIM28A0A1B0GU29 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.29□□□□□ -1.56
SMIM28A0A1B0GU29 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SMIM28A0A1B0GU29 AL121839.2-201ENST00000565058 6943 ntBASIC5.29□□□□□ -1.56
SMIM28A0A1B0GU29 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.29□□□□□ -1.56
SMIM28A0A1B0GU29 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.29□□□□□ -1.56
SMIM28A0A1B0GU29 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
SMIM28A0A1B0GU29 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
SMIM28A0A1B0GU29 AC004817.4-201ENST00000602396 3625 ntBASIC5.29□□□□□ -1.56
SMIM28A0A1B0GU29 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SMIM28A0A1B0GU29 AC123912.3-201ENST00000600907 1367 ntBASIC5.29□□□□□ -1.56
SMIM28A0A1B0GU29 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SMIM28A0A1B0GU29 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
SMIM28A0A1B0GU29 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.28□□□□□ -1.56
SMIM28A0A1B0GU29 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.28□□□□□ -1.56
SMIM28A0A1B0GU29 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SMIM28A0A1B0GU29 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.28□□□□□ -1.56
SMIM28A0A1B0GU29 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
SMIM28A0A1B0GU29 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
SMIM28A0A1B0GU29 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
SMIM28A0A1B0GU29 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SMIM28A0A1B0GU29 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SMIM28A0A1B0GU29 RNA5SP345-201ENST00000410646 108 ntBASIC5.28□□□□□ -1.56
SMIM28A0A1B0GU29 RN7SKP100-201ENST00000411258 284 ntBASIC5.28□□□□□ -1.56
SMIM28A0A1B0GU29 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.28□□□□□ -1.56
SMIM28A0A1B0GU29 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.28□□□□□ -1.56
SMIM28A0A1B0GU29 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.28□□□□□ -1.56
SMIM28A0A1B0GU29 AC073052.1-201ENST00000440417 714 ntBASIC5.28□□□□□ -1.56
SMIM28A0A1B0GU29 OR1H1P-201ENST00000448731 937 ntBASIC5.28□□□□□ -1.56
SMIM28A0A1B0GU29 AC010733.1-201ENST00000451515 401 ntBASIC5.28□□□□□ -1.56
SMIM28A0A1B0GU29 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.28□□□□□ -1.56
SMIM28A0A1B0GU29 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC5.28□□□□□ -1.56
SMIM28A0A1B0GU29 AC093815.1-201ENST00000508637 280 ntBASIC5.28□□□□□ -1.56
SMIM28A0A1B0GU29 AC026688.1-201ENST00000520639 1168 ntBASIC5.28□□□□□ -1.56
SMIM28A0A1B0GU29 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.28□□□□□ -1.56
SMIM28A0A1B0GU29 AP001880.2-201ENST00000538233 448 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms