Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm15378-201ENSMUST00000121894 207 ntBASIC15.69■□□□□ 0.1
Trim39Q9ESN2 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.69■□□□□ 0.1
Trim39Q9ESN2 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim39Q9ESN2 Gm37292-201ENSMUST00000192062 758 ntBASIC15.69■□□□□ 0.1
Trim39Q9ESN2 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim39Q9ESN2 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim39Q9ESN2 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim39Q9ESN2 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim39Q9ESN2 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.69■□□□□ 0.1
Trim39Q9ESN2 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim39Q9ESN2 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim39Q9ESN2 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim39Q9ESN2 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim39Q9ESN2 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim39Q9ESN2 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim39Q9ESN2 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim39Q9ESN2 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Trim39Q9ESN2 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.68■□□□□ 0.1
Trim39Q9ESN2 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.68■□□□□ 0.1
Trim39Q9ESN2 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Trim39Q9ESN2 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim39Q9ESN2 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Trim39Q9ESN2 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim39Q9ESN2 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim39Q9ESN2 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim39Q9ESN2 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim39Q9ESN2 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC15.68■□□□□ 0.1
Trim39Q9ESN2 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim39Q9ESN2 Mir8112-201ENSMUST00000184382 131 ntBASIC15.68■□□□□ 0.1
Trim39Q9ESN2 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.68■□□□□ 0.1
Trim39Q9ESN2 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim39Q9ESN2 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim39Q9ESN2 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim39Q9ESN2 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
Trim39Q9ESN2 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim39Q9ESN2 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim39Q9ESN2 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim39Q9ESN2 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trim39Q9ESN2 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trim39Q9ESN2 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim39Q9ESN2 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trim39Q9ESN2 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim39Q9ESN2 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Trim39Q9ESN2 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trim39Q9ESN2 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim39Q9ESN2 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim39Q9ESN2 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.67■□□□□ 0.1
Trim39Q9ESN2 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim39Q9ESN2 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim39Q9ESN2 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim39Q9ESN2 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.67■□□□□ 0.1
Trim39Q9ESN2 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim39Q9ESN2 Gm10698-201ENSMUST00000182663 604 ntBASIC15.67■□□□□ 0.1
Trim39Q9ESN2 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim39Q9ESN2 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim39Q9ESN2 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim39Q9ESN2 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim39Q9ESN2 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim39Q9ESN2 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim39Q9ESN2 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim39Q9ESN2 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim39Q9ESN2 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC15.67■□□□□ 0.1
Trim39Q9ESN2 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim39Q9ESN2 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Trim39Q9ESN2 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.66■□□□□ 0.1
Trim39Q9ESN2 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim39Q9ESN2 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.66■□□□□ 0.1
Trim39Q9ESN2 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim39Q9ESN2 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.66■□□□□ 0.1
Trim39Q9ESN2 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim39Q9ESN2 Gm8520-201ENSMUST00000186517 868 ntBASIC15.66■□□□□ 0.1
Trim39Q9ESN2 Gm43183-201ENSMUST00000200632 547 ntBASIC15.66■□□□□ 0.1
Trim39Q9ESN2 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC15.66■□□□□ 0.1
Trim39Q9ESN2 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim39Q9ESN2 Spcs1-207ENSMUST00000228767 1008 ntBASIC15.66■□□□□ 0.1
Trim39Q9ESN2 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim39Q9ESN2 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim39Q9ESN2 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.66■□□□□ 0.1
Trim39Q9ESN2 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim39Q9ESN2 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim39Q9ESN2 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim39Q9ESN2 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim39Q9ESN2 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim39Q9ESN2 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Trim39Q9ESN2 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Trim39Q9ESN2 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim39Q9ESN2 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim39Q9ESN2 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim39Q9ESN2 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim39Q9ESN2 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim39Q9ESN2 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim39Q9ESN2 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim39Q9ESN2 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim39Q9ESN2 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trim39Q9ESN2 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim39Q9ESN2 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim39Q9ESN2 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim39Q9ESN2 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim39Q9ESN2 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim39Q9ESN2 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms