Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ube3bQ9ES34 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ube3bQ9ES34 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ube3bQ9ES34 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ube3bQ9ES34 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ube3bQ9ES34 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ube3bQ9ES34 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ube3bQ9ES34 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ube3bQ9ES34 Gm27357-201ENSMUST00000183754 135 ntBASIC19.91■□□□□ 0.78
Ube3bQ9ES34 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC19.91■□□□□ 0.78
Ube3bQ9ES34 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC19.91■□□□□ 0.78
Ube3bQ9ES34 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ube3bQ9ES34 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Ube3bQ9ES34 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ube3bQ9ES34 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ube3bQ9ES34 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
Ube3bQ9ES34 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ube3bQ9ES34 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ube3bQ9ES34 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Ube3bQ9ES34 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ube3bQ9ES34 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ube3bQ9ES34 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ube3bQ9ES34 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC19.9■□□□□ 0.78
Ube3bQ9ES34 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ube3bQ9ES34 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
Ube3bQ9ES34 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC19.9■□□□□ 0.78
Ube3bQ9ES34 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ube3bQ9ES34 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ube3bQ9ES34 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ube3bQ9ES34 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ube3bQ9ES34 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC19.9■□□□□ 0.78
Ube3bQ9ES34 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ube3bQ9ES34 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Ube3bQ9ES34 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ube3bQ9ES34 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ube3bQ9ES34 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ube3bQ9ES34 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ube3bQ9ES34 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.9■□□□□ 0.78
Ube3bQ9ES34 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.9■□□□□ 0.78
Ube3bQ9ES34 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Ube3bQ9ES34 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ube3bQ9ES34 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Ube3bQ9ES34 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ube3bQ9ES34 Gm9103-201ENSMUST00000119371 405 ntBASIC19.89■□□□□ 0.77
Ube3bQ9ES34 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC19.89■□□□□ 0.77
Ube3bQ9ES34 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ube3bQ9ES34 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ube3bQ9ES34 Gm17807-201ENSMUST00000186869 298 ntBASIC19.89■□□□□ 0.77
Ube3bQ9ES34 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.89■□□□□ 0.77
Ube3bQ9ES34 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC19.89■□□□□ 0.77
Ube3bQ9ES34 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC19.89■□□□□ 0.77
Ube3bQ9ES34 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ube3bQ9ES34 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ube3bQ9ES34 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ube3bQ9ES34 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Ube3bQ9ES34 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ube3bQ9ES34 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ube3bQ9ES34 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Ube3bQ9ES34 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ube3bQ9ES34 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ube3bQ9ES34 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ube3bQ9ES34 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Ube3bQ9ES34 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC19.88■□□□□ 0.77
Ube3bQ9ES34 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ube3bQ9ES34 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ube3bQ9ES34 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ube3bQ9ES34 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ube3bQ9ES34 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ube3bQ9ES34 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.88■□□□□ 0.77
Ube3bQ9ES34 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ube3bQ9ES34 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ube3bQ9ES34 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ube3bQ9ES34 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC19.87■□□□□ 0.77
Ube3bQ9ES34 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC19.87■□□□□ 0.77
Ube3bQ9ES34 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ube3bQ9ES34 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Ube3bQ9ES34 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
Ube3bQ9ES34 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ube3bQ9ES34 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Ube3bQ9ES34 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ube3bQ9ES34 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ube3bQ9ES34 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ube3bQ9ES34 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ube3bQ9ES34 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ube3bQ9ES34 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ube3bQ9ES34 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC19.86■□□□□ 0.77
Ube3bQ9ES34 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC19.86■□□□□ 0.77
Ube3bQ9ES34 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ube3bQ9ES34 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Ube3bQ9ES34 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Ube3bQ9ES34 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ube3bQ9ES34 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
Ube3bQ9ES34 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ube3bQ9ES34 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ube3bQ9ES34 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ube3bQ9ES34 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Ube3bQ9ES34 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.86■□□□□ 0.77
Ube3bQ9ES34 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC19.86■□□□□ 0.77
Ube3bQ9ES34 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ube3bQ9ES34 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms