Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDLIM5Q96HC4 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PDLIM5Q96HC4 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDLIM5Q96HC4 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PDLIM5Q96HC4 AC018445.3-201ENST00000624177 1945 ntBASIC19.11■□□□□ 0.65
PDLIM5Q96HC4 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
PDLIM5Q96HC4 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDLIM5Q96HC4 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.11■□□□□ 0.65
PDLIM5Q96HC4 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
PDLIM5Q96HC4 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
PDLIM5Q96HC4 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.1■□□□□ 0.65
PDLIM5Q96HC4 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDLIM5Q96HC4 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PDLIM5Q96HC4 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
PDLIM5Q96HC4 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDLIM5Q96HC4 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDLIM5Q96HC4 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDLIM5Q96HC4 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
PDLIM5Q96HC4 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDLIM5Q96HC4 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PDLIM5Q96HC4 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDLIM5Q96HC4 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDLIM5Q96HC4 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDLIM5Q96HC4 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.1■□□□□ 0.65
PDLIM5Q96HC4 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.1■□□□□ 0.65
PDLIM5Q96HC4 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.1■□□□□ 0.65
PDLIM5Q96HC4 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.1■□□□□ 0.65
PDLIM5Q96HC4 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.1■□□□□ 0.65
PDLIM5Q96HC4 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.1■□□□□ 0.65
PDLIM5Q96HC4 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
PDLIM5Q96HC4 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.1■□□□□ 0.65
PDLIM5Q96HC4 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
PDLIM5Q96HC4 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDLIM5Q96HC4 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDLIM5Q96HC4 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PDLIM5Q96HC4 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.1■□□□□ 0.65
PDLIM5Q96HC4 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDLIM5Q96HC4 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.1■□□□□ 0.65
PDLIM5Q96HC4 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PDLIM5Q96HC4 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PDLIM5Q96HC4 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.09■□□□□ 0.65
PDLIM5Q96HC4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDLIM5Q96HC4 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.09■□□□□ 0.65
PDLIM5Q96HC4 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.09■□□□□ 0.65
PDLIM5Q96HC4 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDLIM5Q96HC4 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDLIM5Q96HC4 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.09■□□□□ 0.65
PDLIM5Q96HC4 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
PDLIM5Q96HC4 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.09■□□□□ 0.65
PDLIM5Q96HC4 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.09■□□□□ 0.65
PDLIM5Q96HC4 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PDLIM5Q96HC4 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.09■□□□□ 0.65
PDLIM5Q96HC4 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.09■□□□□ 0.65
PDLIM5Q96HC4 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDLIM5Q96HC4 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.09■□□□□ 0.65
PDLIM5Q96HC4 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDLIM5Q96HC4 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDLIM5Q96HC4 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDLIM5Q96HC4 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PDLIM5Q96HC4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PDLIM5Q96HC4 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PDLIM5Q96HC4 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
PDLIM5Q96HC4 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
PDLIM5Q96HC4 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
PDLIM5Q96HC4 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PDLIM5Q96HC4 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PDLIM5Q96HC4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
PDLIM5Q96HC4 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PDLIM5Q96HC4 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PDLIM5Q96HC4 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
PDLIM5Q96HC4 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PDLIM5Q96HC4 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PDLIM5Q96HC4 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PDLIM5Q96HC4 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PDLIM5Q96HC4 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PDLIM5Q96HC4 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.08■□□□□ 0.64
PDLIM5Q96HC4 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PDLIM5Q96HC4 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.08■□□□□ 0.64
PDLIM5Q96HC4 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PDLIM5Q96HC4 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PDLIM5Q96HC4 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.07■□□□□ 0.64
PDLIM5Q96HC4 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDLIM5Q96HC4 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PDLIM5Q96HC4 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDLIM5Q96HC4 TUBB8P6-201ENST00000436895 1288 ntBASIC19.07■□□□□ 0.64
PDLIM5Q96HC4 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.07■□□□□ 0.64
PDLIM5Q96HC4 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.07■□□□□ 0.64
PDLIM5Q96HC4 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.07■□□□□ 0.64
PDLIM5Q96HC4 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PDLIM5Q96HC4 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PDLIM5Q96HC4 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
PDLIM5Q96HC4 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDLIM5Q96HC4 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDLIM5Q96HC4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.07■□□□□ 0.64
PDLIM5Q96HC4 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDLIM5Q96HC4 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDLIM5Q96HC4 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDLIM5Q96HC4 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.06■□□□□ 0.64
PDLIM5Q96HC4 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PDLIM5Q96HC4 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms