Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
RTF1Q92541 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RTF1Q92541 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC25.53■■□□□ 1.68
RTF1Q92541 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC25.53■■□□□ 1.68
RTF1Q92541 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RTF1Q92541 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RTF1Q92541 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC25.52■■□□□ 1.68
RTF1Q92541 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RTF1Q92541 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
RTF1Q92541 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
RTF1Q92541 B3GAT3P1-201ENST00000471720 806 ntBASIC25.52■■□□□ 1.68
RTF1Q92541 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC25.52■■□□□ 1.68
RTF1Q92541 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
RTF1Q92541 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC25.52■■□□□ 1.68
RTF1Q92541 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC25.52■■□□□ 1.68
RTF1Q92541 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RTF1Q92541 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC25.52■■□□□ 1.68
RTF1Q92541 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC25.52■■□□□ 1.68
RTF1Q92541 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC25.52■■□□□ 1.68
RTF1Q92541 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
RTF1Q92541 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RTF1Q92541 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
RTF1Q92541 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
RTF1Q92541 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RTF1Q92541 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
RTF1Q92541 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RTF1Q92541 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC25.51■■□□□ 1.68
RTF1Q92541 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RTF1Q92541 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
RTF1Q92541 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RTF1Q92541 USP39-204ENST00000409766 2033 ntTSL 2 BASIC25.51■■□□□ 1.67
RTF1Q92541 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RTF1Q92541 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC25.51■■□□□ 1.67
RTF1Q92541 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC25.51■■□□□ 1.67
RTF1Q92541 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC25.51■■□□□ 1.67
RTF1Q92541 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC25.51■■□□□ 1.67
RTF1Q92541 AC011506.1-201ENST00000474329 610 ntBASIC25.51■■□□□ 1.67
RTF1Q92541 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC25.51■■□□□ 1.67
RTF1Q92541 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC25.51■■□□□ 1.67
RTF1Q92541 AC097493.4-201ENST00000641197 219 ntBASIC25.51■■□□□ 1.67
RTF1Q92541 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RTF1Q92541 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RTF1Q92541 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
RTF1Q92541 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RTF1Q92541 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
RTF1Q92541 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RTF1Q92541 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
RTF1Q92541 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC25.5■■□□□ 1.67
RTF1Q92541 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
RTF1Q92541 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
RTF1Q92541 AL390955.1-201ENST00000428694 934 ntBASIC25.5■■□□□ 1.67
RTF1Q92541 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC25.5■■□□□ 1.67
RTF1Q92541 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
RTF1Q92541 FITM1-202ENST00000559294 800 ntBASIC25.5■■□□□ 1.67
RTF1Q92541 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC25.5■■□□□ 1.67
RTF1Q92541 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC25.5■■□□□ 1.67
RTF1Q92541 AC012306.2-201ENST00000609350 630 ntBASIC25.5■■□□□ 1.67
RTF1Q92541 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
RTF1Q92541 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
RTF1Q92541 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC25.49■■□□□ 1.67
RTF1Q92541 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
RTF1Q92541 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC25.49■■□□□ 1.67
RTF1Q92541 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
RTF1Q92541 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
RTF1Q92541 KRT8P9-201ENST00000558927 1449 ntBASIC25.49■■□□□ 1.67
RTF1Q92541 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RTF1Q92541 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RTF1Q92541 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC25.49■■□□□ 1.67
RTF1Q92541 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC25.49■■□□□ 1.67
RTF1Q92541 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC25.49■■□□□ 1.67
RTF1Q92541 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
RTF1Q92541 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC25.49■■□□□ 1.67
RTF1Q92541 GRAMD4P8-201ENST00000605465 1115 ntBASIC25.49■■□□□ 1.67
RTF1Q92541 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC25.49■■□□□ 1.67
RTF1Q92541 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
RTF1Q92541 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
RTF1Q92541 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC25.49■■□□□ 1.67
RTF1Q92541 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
RTF1Q92541 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
RTF1Q92541 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
RTF1Q92541 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RTF1Q92541 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RTF1Q92541 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RTF1Q92541 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RTF1Q92541 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
RTF1Q92541 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC25.48■■□□□ 1.67
RTF1Q92541 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
RTF1Q92541 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
RTF1Q92541 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RTF1Q92541 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RTF1Q92541 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
RTF1Q92541 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
RTF1Q92541 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC25.48■■□□□ 1.67
RTF1Q92541 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RTF1Q92541 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC25.48■■□□□ 1.67
RTF1Q92541 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
RTF1Q92541 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
RTF1Q92541 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
RTF1Q92541 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
RTF1Q92541 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms