Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tram1Q91V04 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tram1Q91V04 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tram1Q91V04 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.47□□□□□ -0.09
Tram1Q91V04 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tram1Q91V04 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC14.47□□□□□ -0.09
Tram1Q91V04 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Tram1Q91V04 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Tram1Q91V04 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Tram1Q91V04 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Tram1Q91V04 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tram1Q91V04 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tram1Q91V04 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Tram1Q91V04 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tram1Q91V04 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Tram1Q91V04 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.47□□□□□ -0.09
Tram1Q91V04 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tram1Q91V04 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Tram1Q91V04 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tram1Q91V04 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tram1Q91V04 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tram1Q91V04 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tram1Q91V04 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Tram1Q91V04 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.47□□□□□ -0.09
Tram1Q91V04 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Tram1Q91V04 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tram1Q91V04 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Tram1Q91V04 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tram1Q91V04 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tram1Q91V04 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.46□□□□□ -0.09
Tram1Q91V04 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tram1Q91V04 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tram1Q91V04 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tram1Q91V04 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Tram1Q91V04 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tram1Q91V04 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tram1Q91V04 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Tram1Q91V04 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tram1Q91V04 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Tram1Q91V04 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Tram1Q91V04 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tram1Q91V04 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.46□□□□□ -0.09
Tram1Q91V04 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Tram1Q91V04 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Tram1Q91V04 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Tram1Q91V04 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Tram1Q91V04 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.1
Tram1Q91V04 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Tram1Q91V04 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Tram1Q91V04 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Tram1Q91V04 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tram1Q91V04 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Tram1Q91V04 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tram1Q91V04 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.45□□□□□ -0.1
Tram1Q91V04 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tram1Q91V04 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tram1Q91V04 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Tram1Q91V04 Mir6349-201ENSMUST00000184059 97 ntBASIC14.45□□□□□ -0.1
Tram1Q91V04 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC14.45□□□□□ -0.1
Tram1Q91V04 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.45□□□□□ -0.1
Tram1Q91V04 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tram1Q91V04 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tram1Q91V04 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tram1Q91V04 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tram1Q91V04 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.45□□□□□ -0.1
Tram1Q91V04 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Tram1Q91V04 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tram1Q91V04 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tram1Q91V04 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tram1Q91V04 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tram1Q91V04 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.44□□□□□ -0.1
Tram1Q91V04 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tram1Q91V04 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tram1Q91V04 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tram1Q91V04 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tram1Q91V04 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tram1Q91V04 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tram1Q91V04 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tram1Q91V04 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Tram1Q91V04 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC14.44□□□□□ -0.1
Tram1Q91V04 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tram1Q91V04 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.44□□□□□ -0.1
Tram1Q91V04 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Tram1Q91V04 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Tram1Q91V04 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tram1Q91V04 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
Tram1Q91V04 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tram1Q91V04 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tram1Q91V04 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tram1Q91V04 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tram1Q91V04 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tram1Q91V04 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tram1Q91V04 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.44□□□□□ -0.1
Tram1Q91V04 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tram1Q91V04 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tram1Q91V04 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tram1Q91V04 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tram1Q91V04 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tram1Q91V04 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tram1Q91V04 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms