Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC33Q8N5R6 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC33Q8N5R6 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC33Q8N5R6 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.5■□□□□ 0.87
CCDC33Q8N5R6 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
CCDC33Q8N5R6 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC33Q8N5R6 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.5■□□□□ 0.87
CCDC33Q8N5R6 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.5■□□□□ 0.87
CCDC33Q8N5R6 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC33Q8N5R6 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC33Q8N5R6 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC33Q8N5R6 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC33Q8N5R6 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC33Q8N5R6 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.5■□□□□ 0.87
CCDC33Q8N5R6 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.5■□□□□ 0.87
CCDC33Q8N5R6 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC33Q8N5R6 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC33Q8N5R6 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC33Q8N5R6 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
CCDC33Q8N5R6 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.5■□□□□ 0.87
CCDC33Q8N5R6 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC33Q8N5R6 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC33Q8N5R6 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC33Q8N5R6 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC33Q8N5R6 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC33Q8N5R6 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CCDC33Q8N5R6 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC33Q8N5R6 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC33Q8N5R6 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC33Q8N5R6 FAM210CP-201ENST00000445714 574 ntBASIC20.49■□□□□ 0.87
CCDC33Q8N5R6 KRT18P21-201ENST00000515767 1272 ntBASIC20.49■□□□□ 0.87
CCDC33Q8N5R6 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.49■□□□□ 0.87
CCDC33Q8N5R6 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.49■□□□□ 0.87
CCDC33Q8N5R6 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CCDC33Q8N5R6 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.49■□□□□ 0.87
CCDC33Q8N5R6 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC33Q8N5R6 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC33Q8N5R6 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CCDC33Q8N5R6 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CCDC33Q8N5R6 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CCDC33Q8N5R6 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC33Q8N5R6 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.49■□□□□ 0.87
CCDC33Q8N5R6 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC33Q8N5R6 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC33Q8N5R6 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC33Q8N5R6 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.48■□□□□ 0.87
CCDC33Q8N5R6 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CCDC33Q8N5R6 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC33Q8N5R6 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC33Q8N5R6 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC33Q8N5R6 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC33Q8N5R6 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC33Q8N5R6 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC33Q8N5R6 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CCDC33Q8N5R6 MIR1224-201ENST00000408193 85 ntBASIC20.48■□□□□ 0.87
CCDC33Q8N5R6 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.48■□□□□ 0.87
CCDC33Q8N5R6 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.48■□□□□ 0.87
CCDC33Q8N5R6 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.48■□□□□ 0.87
CCDC33Q8N5R6 MIR4785-201ENST00000585005 73 ntBASIC20.48■□□□□ 0.87
CCDC33Q8N5R6 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CCDC33Q8N5R6 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CCDC33Q8N5R6 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC33Q8N5R6 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC33Q8N5R6 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.47■□□□□ 0.87
CCDC33Q8N5R6 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.47■□□□□ 0.87
CCDC33Q8N5R6 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
CCDC33Q8N5R6 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC33Q8N5R6 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC33Q8N5R6 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.47■□□□□ 0.87
CCDC33Q8N5R6 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.47■□□□□ 0.87
CCDC33Q8N5R6 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.47■□□□□ 0.87
CCDC33Q8N5R6 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC33Q8N5R6 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.47■□□□□ 0.87
CCDC33Q8N5R6 RARRES2P10-201ENST00000564312 460 ntBASIC20.47■□□□□ 0.87
CCDC33Q8N5R6 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.47■□□□□ 0.87
CCDC33Q8N5R6 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.47■□□□□ 0.87
CCDC33Q8N5R6 AC124283.5-201ENST00000624661 1809 ntBASIC20.47■□□□□ 0.87
CCDC33Q8N5R6 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.47■□□□□ 0.87
CCDC33Q8N5R6 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC33Q8N5R6 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC33Q8N5R6 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.47■□□□□ 0.87
CCDC33Q8N5R6 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC33Q8N5R6 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
CCDC33Q8N5R6 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.46■□□□□ 0.87
CCDC33Q8N5R6 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC33Q8N5R6 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.46■□□□□ 0.87
CCDC33Q8N5R6 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.46■□□□□ 0.87
CCDC33Q8N5R6 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.46■□□□□ 0.87
CCDC33Q8N5R6 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.46■□□□□ 0.87
CCDC33Q8N5R6 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.46■□□□□ 0.87
CCDC33Q8N5R6 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.46■□□□□ 0.87
CCDC33Q8N5R6 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC33Q8N5R6 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
CCDC33Q8N5R6 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC33Q8N5R6 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC33Q8N5R6 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC33Q8N5R6 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.46■□□□□ 0.87
CCDC33Q8N5R6 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.46■□□□□ 0.87
CCDC33Q8N5R6 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.46■□□□□ 0.87
CCDC33Q8N5R6 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms