Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col23a1Q8K4G2 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col23a1Q8K4G2 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Col23a1Q8K4G2 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Col23a1Q8K4G2 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col23a1Q8K4G2 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col23a1Q8K4G2 Gm9889-202ENSMUST00000206983 1577 ntBASIC20.35■□□□□ 0.85
Col23a1Q8K4G2 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col23a1Q8K4G2 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col23a1Q8K4G2 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.35■□□□□ 0.85
Col23a1Q8K4G2 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC20.35■□□□□ 0.85
Col23a1Q8K4G2 Gm8655-201ENSMUST00000221159 852 ntBASIC20.35■□□□□ 0.85
Col23a1Q8K4G2 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col23a1Q8K4G2 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Col23a1Q8K4G2 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col23a1Q8K4G2 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col23a1Q8K4G2 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col23a1Q8K4G2 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC20.34■□□□□ 0.85
Col23a1Q8K4G2 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC20.34■□□□□ 0.85
Col23a1Q8K4G2 Gm44872-201ENSMUST00000207864 420 ntBASIC20.34■□□□□ 0.85
Col23a1Q8K4G2 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col23a1Q8K4G2 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col23a1Q8K4G2 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col23a1Q8K4G2 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
Col23a1Q8K4G2 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col23a1Q8K4G2 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col23a1Q8K4G2 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col23a1Q8K4G2 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Col23a1Q8K4G2 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col23a1Q8K4G2 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Col23a1Q8K4G2 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Col23a1Q8K4G2 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.33■□□□□ 0.85
Col23a1Q8K4G2 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Col23a1Q8K4G2 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Col23a1Q8K4G2 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Col23a1Q8K4G2 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC20.33■□□□□ 0.85
Col23a1Q8K4G2 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC20.33■□□□□ 0.85
Col23a1Q8K4G2 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC20.33■□□□□ 0.85
Col23a1Q8K4G2 Gm27321-201ENSMUST00000185021 205 ntBASIC20.33■□□□□ 0.85
Col23a1Q8K4G2 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Col23a1Q8K4G2 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Col23a1Q8K4G2 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Col23a1Q8K4G2 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC20.33■□□□□ 0.84
Col23a1Q8K4G2 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Col23a1Q8K4G2 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col23a1Q8K4G2 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col23a1Q8K4G2 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col23a1Q8K4G2 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Col23a1Q8K4G2 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC20.32■□□□□ 0.84
Col23a1Q8K4G2 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col23a1Q8K4G2 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col23a1Q8K4G2 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Col23a1Q8K4G2 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col23a1Q8K4G2 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC20.32■□□□□ 0.84
Col23a1Q8K4G2 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Col23a1Q8K4G2 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC20.32■□□□□ 0.84
Col23a1Q8K4G2 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col23a1Q8K4G2 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col23a1Q8K4G2 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col23a1Q8K4G2 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Col23a1Q8K4G2 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col23a1Q8K4G2 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Col23a1Q8K4G2 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.31■□□□□ 0.84
Col23a1Q8K4G2 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC20.31■□□□□ 0.84
Col23a1Q8K4G2 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.31■□□□□ 0.84
Col23a1Q8K4G2 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Col23a1Q8K4G2 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Col23a1Q8K4G2 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC20.31■□□□□ 0.84
Col23a1Q8K4G2 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC20.31■□□□□ 0.84
Col23a1Q8K4G2 Gm8349-201ENSMUST00000182720 1003 ntBASIC20.31■□□□□ 0.84
Col23a1Q8K4G2 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Col23a1Q8K4G2 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col23a1Q8K4G2 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col23a1Q8K4G2 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col23a1Q8K4G2 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col23a1Q8K4G2 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col23a1Q8K4G2 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col23a1Q8K4G2 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col23a1Q8K4G2 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col23a1Q8K4G2 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.3■□□□□ 0.84
Col23a1Q8K4G2 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col23a1Q8K4G2 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Col23a1Q8K4G2 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Col23a1Q8K4G2 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Col23a1Q8K4G2 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC20.3■□□□□ 0.84
Col23a1Q8K4G2 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Col23a1Q8K4G2 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col23a1Q8K4G2 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Col23a1Q8K4G2 AC159106.1-201ENSMUST00000224421 690 ntBASIC20.3■□□□□ 0.84
Col23a1Q8K4G2 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col23a1Q8K4G2 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col23a1Q8K4G2 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col23a1Q8K4G2 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC20.3■□□□□ 0.84
Col23a1Q8K4G2 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col23a1Q8K4G2 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col23a1Q8K4G2 Gm45203-201ENSMUST00000206384 1831 ntBASIC20.3■□□□□ 0.84
Col23a1Q8K4G2 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col23a1Q8K4G2 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col23a1Q8K4G2 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col23a1Q8K4G2 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms