Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rif1Q6PR54 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Rif1Q6PR54 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rif1Q6PR54 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rif1Q6PR54 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Rif1Q6PR54 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Rif1Q6PR54 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Rif1Q6PR54 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Rif1Q6PR54 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.1□□□□□ -0.15
Rif1Q6PR54 Gm43433-201ENSMUST00000196573 481 ntBASIC14.1□□□□□ -0.15
Rif1Q6PR54 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC14.1□□□□□ -0.15
Rif1Q6PR54 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Rif1Q6PR54 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.1□□□□□ -0.15
Rif1Q6PR54 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rif1Q6PR54 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rif1Q6PR54 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rif1Q6PR54 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rif1Q6PR54 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rif1Q6PR54 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Rif1Q6PR54 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.1□□□□□ -0.15
Rif1Q6PR54 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC14.1□□□□□ -0.15
Rif1Q6PR54 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rif1Q6PR54 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.1□□□□□ -0.15
Rif1Q6PR54 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.1□□□□□ -0.15
Rif1Q6PR54 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.1□□□□□ -0.15
Rif1Q6PR54 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Rif1Q6PR54 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rif1Q6PR54 Gm18688-201ENSMUST00000204695 1859 ntBASIC14.09□□□□□ -0.15
Rif1Q6PR54 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rif1Q6PR54 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rif1Q6PR54 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rif1Q6PR54 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rif1Q6PR54 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Rif1Q6PR54 Gm44335-201ENSMUST00000196879 141 ntBASIC14.09□□□□□ -0.15
Rif1Q6PR54 Gm44297-201ENSMUST00000198304 141 ntBASIC14.09□□□□□ -0.15
Rif1Q6PR54 Gm44346-201ENSMUST00000198851 141 ntBASIC14.09□□□□□ -0.15
Rif1Q6PR54 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rif1Q6PR54 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rif1Q6PR54 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rif1Q6PR54 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Rif1Q6PR54 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rif1Q6PR54 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Rif1Q6PR54 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rif1Q6PR54 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rif1Q6PR54 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rif1Q6PR54 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rif1Q6PR54 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.09□□□□□ -0.15
Rif1Q6PR54 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rif1Q6PR54 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Rif1Q6PR54 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Rif1Q6PR54 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rif1Q6PR54 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rif1Q6PR54 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Rif1Q6PR54 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rif1Q6PR54 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rif1Q6PR54 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rif1Q6PR54 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rif1Q6PR54 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rif1Q6PR54 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rif1Q6PR54 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.08□□□□□ -0.16
Rif1Q6PR54 Gm18062-201ENSMUST00000208020 547 ntBASIC14.08□□□□□ -0.16
Rif1Q6PR54 Gm18055-201ENSMUST00000208254 547 ntBASIC14.08□□□□□ -0.16
Rif1Q6PR54 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rif1Q6PR54 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rif1Q6PR54 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC14.08□□□□□ -0.16
Rif1Q6PR54 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rif1Q6PR54 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rif1Q6PR54 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rif1Q6PR54 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rif1Q6PR54 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rif1Q6PR54 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rif1Q6PR54 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rif1Q6PR54 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Rif1Q6PR54 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rif1Q6PR54 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rif1Q6PR54 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rif1Q6PR54 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Rif1Q6PR54 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Rif1Q6PR54 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rif1Q6PR54 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Rif1Q6PR54 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rif1Q6PR54 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC14.07□□□□□ -0.16
Rif1Q6PR54 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rif1Q6PR54 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Rif1Q6PR54 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rif1Q6PR54 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rif1Q6PR54 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rif1Q6PR54 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rif1Q6PR54 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rif1Q6PR54 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rif1Q6PR54 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Rif1Q6PR54 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rif1Q6PR54 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rif1Q6PR54 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rif1Q6PR54 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rif1Q6PR54 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Rif1Q6PR54 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rif1Q6PR54 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rif1Q6PR54 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Rif1Q6PR54 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms