Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rc3h1Q4VGL6 Ighv6-1-201ENSMUST00000193612 343 ntBASIC19.35■□□□□ 0.69
Rc3h1Q4VGL6 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rc3h1Q4VGL6 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rc3h1Q4VGL6 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rc3h1Q4VGL6 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rc3h1Q4VGL6 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rc3h1Q4VGL6 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC19.35■□□□□ 0.69
Rc3h1Q4VGL6 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rc3h1Q4VGL6 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rc3h1Q4VGL6 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Rc3h1Q4VGL6 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rc3h1Q4VGL6 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rc3h1Q4VGL6 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rc3h1Q4VGL6 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rc3h1Q4VGL6 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.34■□□□□ 0.69
Rc3h1Q4VGL6 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rc3h1Q4VGL6 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rc3h1Q4VGL6 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rc3h1Q4VGL6 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rc3h1Q4VGL6 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Rc3h1Q4VGL6 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
Rc3h1Q4VGL6 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rc3h1Q4VGL6 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Rc3h1Q4VGL6 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Rc3h1Q4VGL6 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Rc3h1Q4VGL6 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rc3h1Q4VGL6 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC19.34■□□□□ 0.69
Rc3h1Q4VGL6 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rc3h1Q4VGL6 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Rc3h1Q4VGL6 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC19.34■□□□□ 0.69
Rc3h1Q4VGL6 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rc3h1Q4VGL6 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Rc3h1Q4VGL6 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rc3h1Q4VGL6 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rc3h1Q4VGL6 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Rc3h1Q4VGL6 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rc3h1Q4VGL6 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rc3h1Q4VGL6 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rc3h1Q4VGL6 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rc3h1Q4VGL6 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rc3h1Q4VGL6 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rc3h1Q4VGL6 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Rc3h1Q4VGL6 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rc3h1Q4VGL6 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rc3h1Q4VGL6 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rc3h1Q4VGL6 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rc3h1Q4VGL6 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rc3h1Q4VGL6 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rc3h1Q4VGL6 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Rc3h1Q4VGL6 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rc3h1Q4VGL6 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rc3h1Q4VGL6 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rc3h1Q4VGL6 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rc3h1Q4VGL6 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Rc3h1Q4VGL6 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rc3h1Q4VGL6 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Rc3h1Q4VGL6 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rc3h1Q4VGL6 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rc3h1Q4VGL6 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rc3h1Q4VGL6 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.31■□□□□ 0.68
Rc3h1Q4VGL6 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rc3h1Q4VGL6 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Rc3h1Q4VGL6 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rc3h1Q4VGL6 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rc3h1Q4VGL6 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rc3h1Q4VGL6 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19.31■□□□□ 0.68
Rc3h1Q4VGL6 AC125350.1-201ENSMUST00000225115 903 ntBASIC19.31■□□□□ 0.68
Rc3h1Q4VGL6 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
Rc3h1Q4VGL6 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC19.31■□□□□ 0.68
Rc3h1Q4VGL6 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rc3h1Q4VGL6 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rc3h1Q4VGL6 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rc3h1Q4VGL6 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rc3h1Q4VGL6 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rc3h1Q4VGL6 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rc3h1Q4VGL6 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rc3h1Q4VGL6 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rc3h1Q4VGL6 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rc3h1Q4VGL6 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Rc3h1Q4VGL6 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rc3h1Q4VGL6 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC19.3■□□□□ 0.68
Rc3h1Q4VGL6 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rc3h1Q4VGL6 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rc3h1Q4VGL6 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rc3h1Q4VGL6 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rc3h1Q4VGL6 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rc3h1Q4VGL6 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rc3h1Q4VGL6 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC19.3■□□□□ 0.68
Rc3h1Q4VGL6 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC19.3■□□□□ 0.68
Rc3h1Q4VGL6 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rc3h1Q4VGL6 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rc3h1Q4VGL6 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rc3h1Q4VGL6 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC19.3■□□□□ 0.68
Rc3h1Q4VGL6 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rc3h1Q4VGL6 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rc3h1Q4VGL6 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rc3h1Q4VGL6 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rc3h1Q4VGL6 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Rc3h1Q4VGL6 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms