Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Hist1h1aP43275 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hist1h1aP43275 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hist1h1aP43275 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Hist1h1aP43275 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC13.87□□□□□ -0.19
Hist1h1aP43275 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC13.87□□□□□ -0.19
Hist1h1aP43275 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC13.87□□□□□ -0.19
Hist1h1aP43275 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hist1h1aP43275 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC13.87□□□□□ -0.19
Hist1h1aP43275 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC13.87□□□□□ -0.19
Hist1h1aP43275 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Hist1h1aP43275 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hist1h1aP43275 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hist1h1aP43275 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hist1h1aP43275 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Hist1h1aP43275 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hist1h1aP43275 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hist1h1aP43275 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hist1h1aP43275 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hist1h1aP43275 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Hist1h1aP43275 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Hist1h1aP43275 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hist1h1aP43275 AC163280.1-201ENSMUST00000228194 1100 ntBASIC13.86□□□□□ -0.19
Hist1h1aP43275 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Hist1h1aP43275 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hist1h1aP43275 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Hist1h1aP43275 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
Hist1h1aP43275 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hist1h1aP43275 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Hist1h1aP43275 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Hist1h1aP43275 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.86□□□□□ -0.19
Hist1h1aP43275 Gm16499-203ENSMUST00000204633 2177 ntBASIC13.86□□□□□ -0.19
Hist1h1aP43275 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hist1h1aP43275 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hist1h1aP43275 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hist1h1aP43275 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hist1h1aP43275 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Hist1h1aP43275 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC13.86□□□□□ -0.19
Hist1h1aP43275 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hist1h1aP43275 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hist1h1aP43275 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.85□□□□□ -0.19
Hist1h1aP43275 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.85□□□□□ -0.19
Hist1h1aP43275 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hist1h1aP43275 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hist1h1aP43275 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hist1h1aP43275 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hist1h1aP43275 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Hist1h1aP43275 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hist1h1aP43275 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Hist1h1aP43275 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Hist1h1aP43275 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.85□□□□□ -0.19
Hist1h1aP43275 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hist1h1aP43275 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Hist1h1aP43275 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Hist1h1aP43275 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hist1h1aP43275 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC13.85□□□□□ -0.19
Hist1h1aP43275 Gm11249-201ENSMUST00000117071 859 ntBASIC13.85□□□□□ -0.19
Hist1h1aP43275 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC13.85□□□□□ -0.19
Hist1h1aP43275 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Hist1h1aP43275 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC13.85□□□□□ -0.19
Hist1h1aP43275 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hist1h1aP43275 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC13.85□□□□□ -0.19
Hist1h1aP43275 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC13.85□□□□□ -0.19
Hist1h1aP43275 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Hist1h1aP43275 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Hist1h1aP43275 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hist1h1aP43275 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hist1h1aP43275 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hist1h1aP43275 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hist1h1aP43275 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hist1h1aP43275 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC13.85□□□□□ -0.19
Hist1h1aP43275 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Hist1h1aP43275 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hist1h1aP43275 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hist1h1aP43275 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Hist1h1aP43275 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hist1h1aP43275 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hist1h1aP43275 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hist1h1aP43275 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hist1h1aP43275 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hist1h1aP43275 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Hist1h1aP43275 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hist1h1aP43275 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.84□□□□□ -0.19
Hist1h1aP43275 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hist1h1aP43275 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hist1h1aP43275 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hist1h1aP43275 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Hist1h1aP43275 Gm13158-201ENSMUST00000122007 736 ntBASIC13.84□□□□□ -0.19
Hist1h1aP43275 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Hist1h1aP43275 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Hist1h1aP43275 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hist1h1aP43275 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hist1h1aP43275 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hist1h1aP43275 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hist1h1aP43275 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC13.84□□□□□ -0.19
Hist1h1aP43275 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hist1h1aP43275 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hist1h1aP43275 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Hist1h1aP43275 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Hist1h1aP43275 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms